PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KHN42314.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | bHLH | ||||||||
Protein Properties | Length: 353aa MW: 38710.9 Da PI: 4.597 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 33 | 1.1e-10 | 277 | 317 | 10 | 55 |
HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 rrRR+riN+++ L+ l+P+ +K++ +++Le+Av+Y+k Lq KHN42314.1 277 RRRRERINERLRILQHLVPNG-----TKVDISTMLEEAVKYVKFLQ 317 9******************97.....8******************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 3.14E-14 | 266 | 332 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 15.32 | 267 | 316 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 1.7E-12 | 272 | 326 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 3.6E-11 | 273 | 322 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 5.7E-8 | 277 | 317 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0016787 | Molecular Function | hydrolase activity | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 353 aa Download sequence Send to blast |
MDPVEQISEE WSSLSGFYTA EEADFMSQLL GNCSLPENLC GNFNLGIPSA IWPGHESTIV 60 SVTGINESPY FHANADNSNT NYLCFSQGSS FTADSSNIFP TTSGNKCDPV ANIGYMSVGF 120 PLGDAKFSPY NVQGSDSQQI NENTDEELGL EVIADKKLQD HQECEVLVSE AAQEDINTNL 180 EKSGKRSRGS MQVRKSKKNV KSMKKPKSDS ISNSEEGRSP DLQGFCSEDD DSNASQELNG 240 GGSSSLSLED STSLKLKGKK STANRGSATD PQSVYARRRR ERINERLRIL QHLVPNGTKV 300 DISTMLEEAV KYVKFLQLQI KLLSSDDLWM YAPIAYNGMN IGLDLNITPT KQP |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KHN42314.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AC235177 | 0.0 | AC235177.1 Glycine max strain Williams 82 clone GM_WBb0007H11, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_003555293.1 | 0.0 | transcription factor bHLH84 | ||||
Refseq | XP_028221548.1 | 0.0 | transcription factor bHLH84-like | ||||
TrEMBL | A0A445F4M2 | 0.0 | A0A445F4M2_GLYSO; Transcription factor bHLH84 isoform A | ||||
TrEMBL | K7N396 | 0.0 | K7N396_SOYBN; Uncharacterized protein | ||||
STRING | GLYMA20G26991.1 | 0.0 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF807 | 33 | 121 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G14760.1 | 1e-42 | bHLH family protein |
Publications ? help Back to Top | |||
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