PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KHN40508.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | bHLH | ||||||||
Protein Properties | Length: 239aa MW: 26801.9 Da PI: 9.9897 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 31.6 | 2.9e-10 | 83 | 130 | 3 | 55 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r h +Er+RR+++N+++ L + kK +Ka ++++Av+Y+k+L+ KHN40508.1 83 RVHILAERKRREELNKSIVALSATILGF-----KKTDKANVVREAVKYVKQLE 130 56999**********************8.....8*****************96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 5.23E-14 | 80 | 142 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 14.081 | 80 | 129 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 5.6E-12 | 81 | 141 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 8.56E-9 | 81 | 133 | No hit | No description |
Pfam | PF00010 | 6.0E-8 | 84 | 130 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 1.9E-9 | 86 | 135 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0055114 | Biological Process | oxidation-reduction process | ||||
GO:0032440 | Molecular Function | 2-alkenal reductase [NAD(P)] activity | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 239 aa Download sequence Send to blast |
MIFQQQVFSP KSKPSSSSSS SSSSSSFLQS NLKSCSSFST GGYVLSFDNN HIVEPRYPQN 60 PFSKSVAQSH CVEPKAFPRT RPRVHILAER KRREELNKSI VALSATILGF KKTDKANVVR 120 EAVKYVKQLE ERVNELENQK RKEGVNSIIL TKKTPLSINN IDQAITHGCV DVEEEVLKVK 180 VTVLDKELLI GIYCEKQRQT MLKILSLLDD LHLSITPTSV LPFGTSTLKI TIIAQVHYI |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 88 | 93 | ERKRRE |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KHN40508.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028212147.1 | 1e-171 | transcription factor bHLH25-like | ||||
TrEMBL | A0A0R0FFK3 | 1e-139 | A0A0R0FFK3_SOYBN; Uncharacterized protein | ||||
STRING | GLYMA18G48143.1 | 1e-141 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF18728 | 4 | 6 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37850.1 | 8e-26 | bHLH family protein |
Publications ? help Back to Top | |||
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