PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN40507.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 269aa    MW: 30405.8 Da    PI: 7.2205
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN40507.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.64.1e-12101147455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  h  +Er+RR+++  ++  L   +P +     kK +K+++L++Av+Y+k+Lq
  KHN40507.1 101 VHILAERKRREELTRCIIALSATIPGL-----KKTDKVTVLREAVNYVKQLQ 147
                 5899***********************.....9******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.59697146IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.13E-15100158IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.8E-15101158IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.8E-10101147IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.04E-10102151No hitNo description
SMARTSM003533.2E-13103152IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0055114Biological Processoxidation-reduction process
GO:0032440Molecular Function2-alkenal reductase [NAD(P)] activity
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    Send to blast
MGGDDFFNIQ SHGHMSPFNE EEYSSGERDM IVQQQVFSPN LSSSSLQSNL ELPYSSSPTG  60
NVLSFDNPLV GSLHPQNDSA KSMEQSHCVE PKAYPRTNAQ VHILAERKRR EELTRCIIAL  120
SATIPGLKKT DKVTVLREAV NYVKQLQERV KELENQMRKE CVNSIILTKK ALICKNDRVE  180
ELLEVKVTVL DKEVLIGVHC EKQRKSLLKI LSLLNNLHLS ITSTSVLPFG SSTLKITIIS  240
QMDDEYNMTL DDLVRTLRQR ILSLKSHDT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1105110ERKRRE
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN40507.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028213432.10.0transcription factor bHLH25-like
TrEMBLA0A445FWH10.0A0A445FWH1_GLYSO; Transcription factor bHLH25 (Fragment)
STRINGGLYMA18G48143.13e-91(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3662722
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.12e-28bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]