PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN38014.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 328aa    MW: 36851.3 Da    PI: 6.19
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN38014.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.35.7e-13147192555
                 HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 h ++ErrRR+++ ++f  L   +P +      K +Ka++L+ A++Y+k+Lq
  KHN38014.1 147 HIMAERRRRQDLTERFIALSATIPGL-----SKTDKASVLRAAIDYLKQLQ 192
                 999**********************8.....7******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.828142191IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.93E-17143204IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.40E-13147196No hitNo description
PfamPF000101.5E-10147192IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.1E-16147204IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.8E-15148197IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0055114Biological Processoxidation-reduction process
GO:0032440Molecular Function2-alkenal reductase [NAD(P)] activity
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    Send to blast
MEEPWENWHL HMEMDCGNDF SGKCHGTHDD EFLRDILLQQ PPAAFSSESE SDHSFRPVVQ  60
NTTITNDGAV KSNSSQNSSK RPRPLSTPRT YILSFDNSTM LPASPEPRLR SSNNNSPWPP  120
ESPGPEPRRP ITGGAKKTRT SSQTIDHIMA ERRRRQDLTE RFIALSATIP GLSKTDKASV  180
LRAAIDYLKQ LQERVQELEK QDKKRSKESV IFNKKPDPNG NNNEDTTTST ETNCSILPEM  240
EVRVLGKEVL IEIHCEKENG VELKILDHLE NLHLSVTGSS VLPFGNSSLC ITITAQMGEG  300
YQMTMNDLVK NLRQVLSKSH LLSDSDPY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17983KRPRP
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN38014.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By ethylene (ACC) and jasmonic acid (JA) treatments. {ECO:0000269|PubMed:12679534}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028244964.10.0transcription factor bHLH18-like
SwissprotQ9T0721e-43BH025_ARATH; Transcription factor bHLH25
TrEMBLA0A445JI370.0A0A445JI37_GLYSO; Transcription factor bHLH25 isoform A
STRINGGLYMA08G23050.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF131101230
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.18e-42bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]