PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KHN37807.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | bHLH | ||||||||
Protein Properties | Length: 504aa MW: 56054.2 Da PI: 6.6119 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 11.6 | 0.00051 | 400 | 432 | 18 | 55 |
HHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 18 safeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++ L++++ + +K + a++L +A+ YIk Lq KHN37807.1 400 DKITALQQIVSPF-----GKTDTASVLFEAIGYIKFLQ 432 7888889988887.....8******************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 9.642 | 382 | 431 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 3.14E-9 | 397 | 446 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 5.0E-8 | 397 | 439 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 1.41E-4 | 400 | 436 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 504 aa Download sequence Send to blast |
MTEESAGNTV ATSITPFNWW YLQANSLSSW NDTNSTWSNQ PNPNSSSSCE EDISVSTSFT 60 NASNHSSLTV ESSRRLIEPP APSSTELMGE HASDNQLWSH VLSGVGSDGE LHNSQEIGEN 120 FLDALSSKSM TSTMFQPVCD YLKKLDHTSW EYNGSTSLNS FEKHLNGFSE AMLENNERLT 180 KLSNLVSTWS IAPPDPEVSS HFDPQKTNNM SLSSNSMDHH FPQFEHFKQP FEEASRNSGV 240 FPNCYDHDMK VKQEYHASEV SPGSVFGKPL NANGYRNGFN SLSVVDSCKL YHDMPNISSC 300 TRNFSDVISF NSRLGWPVIG VHGQKPSMKY LNVSEPKKQG LQTPSPPIRT NVNGKGEGTT 360 REVKKKRSEE SSDAMLKKPK QDTSTASSSK VQAPKVKLGD KITALQQIVS PFGKTDTASV 420 LFEAIGYIKF LQEQVQLLSN PFLKANSHKD PWGSLDRKDH KEDTKLDLRS RGLCLVPTSC 480 TPLVYRESSG PDYWTPAYRG CLYR |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KHN37807.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | BT092677 | 0.0 | BT092677.1 Soybean clone JCVI-FLGm-11D9 unknown mRNA. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006589396.1 | 0.0 | transcription factor bHLH111 isoform X3 | ||||
Refseq | XP_028183173.1 | 0.0 | transcription factor bHLH111-like isoform X3 | ||||
TrEMBL | A0A445IQ93 | 0.0 | A0A445IQ93_GLYSO; Transcription factor bHLH111 isoform A | ||||
TrEMBL | I1LCV3 | 0.0 | I1LCV3_SOYBN; Uncharacterized protein | ||||
STRING | GLYMA10G35040.1 | 0.0 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF10116 | 26 | 29 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G31050.1 | 7e-66 | bHLH family protein |
Publications ? help Back to Top | |||
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