PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN37607.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 437aa    MW: 48292.4 Da    PI: 8.7494
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN37607.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.69.7e-13371416655
                 HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +++Er RR ri  ++ +L++l Pk+    +k  s a++L +AveYIk+Lq
  KHN37607.1 371 SIAERERRTRISARIKKLQDLFPKS----DKQTSTADMLDLAVEYIKDLQ 416
                 689*********************9....788*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.259365415IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.79E-14368428IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.15E-11369420No hitNo description
Gene3DG3DSA:4.10.280.101.0E-13370426IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.7E-10371416IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.6E-11371421IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 437 aa     Download sequence    Send to blast
MSIVYSHAVK YSRGETRMNP EMDSNIGQHC HQQNSGLMRY RSAPSSLLTS LVNNNNNNNG  60
YVNGESFRSE HNHHRHQQQQ QQHYPPSTSS EMENMLAKLI SSNNSEPLQM KEEAGDSVSQ  120
PPQQHNGYSY GSSPQMMYQT QQIQGLPIPN GSLGASGSAF DGSFSAVNSL ASQNSTQPKM  180
GASTNCNNLI RQKSSPAGFF SNYSVDNALR DVASFRGCDV SNGQAITSSS GLHGTLNFSS  240
RPSSCSTRMP QIAENGNEDV EANCVESRNL RNDNINNTKC YMPSFTTDFW DGSAFSASRT  300
ASNSGEISFS TSKAMDIQDE DFGYQKVGLT HHLSLPGSSS RMATMEKLYQ IQGSVPCKIR  360
AKRGFATHPR SIAERERRTR ISARIKKLQD LFPKSDKQTS TADMLDLAVE YIKDLQKQVK  420
ILRDTRAKCT CTSNQKH
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN37607.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0991790.0BT099179.1 Soybean clone JCVI-FLGm-26J2 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028186921.10.0transcription factor bHLH130-like isoform X2
TrEMBLA0A445I7M80.0A0A445I7M8_GLYSO; Transcription factor bHLH130 isoform E
STRINGGLYMA13G27455.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF40053359
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.13e-48bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]