PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KHN37607.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | bHLH | ||||||||
Protein Properties | Length: 437aa MW: 48292.4 Da PI: 8.7494 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 39.6 | 9.7e-13 | 371 | 416 | 6 | 55 |
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR ri ++ +L++l Pk+ +k s a++L +AveYIk+Lq KHN37607.1 371 SIAERERRTRISARIKKLQDLFPKS----DKQTSTADMLDLAVEYIKDLQ 416 689*********************9....788*****************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 14.259 | 365 | 415 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 3.79E-14 | 368 | 428 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 2.15E-11 | 369 | 420 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 1.0E-13 | 370 | 426 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 7.7E-10 | 371 | 416 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 3.6E-11 | 371 | 421 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 437 aa Download sequence Send to blast |
MSIVYSHAVK YSRGETRMNP EMDSNIGQHC HQQNSGLMRY RSAPSSLLTS LVNNNNNNNG 60 YVNGESFRSE HNHHRHQQQQ QQHYPPSTSS EMENMLAKLI SSNNSEPLQM KEEAGDSVSQ 120 PPQQHNGYSY GSSPQMMYQT QQIQGLPIPN GSLGASGSAF DGSFSAVNSL ASQNSTQPKM 180 GASTNCNNLI RQKSSPAGFF SNYSVDNALR DVASFRGCDV SNGQAITSSS GLHGTLNFSS 240 RPSSCSTRMP QIAENGNEDV EANCVESRNL RNDNINNTKC YMPSFTTDFW DGSAFSASRT 300 ASNSGEISFS TSKAMDIQDE DFGYQKVGLT HHLSLPGSSS RMATMEKLYQ IQGSVPCKIR 360 AKRGFATHPR SIAERERRTR ISARIKKLQD LFPKSDKQTS TADMLDLAVE YIKDLQKQVK 420 ILRDTRAKCT CTSNQKH |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KHN37607.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | BT099179 | 0.0 | BT099179.1 Soybean clone JCVI-FLGm-26J2 unknown mRNA. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028186921.1 | 0.0 | transcription factor bHLH130-like isoform X2 | ||||
TrEMBL | A0A445I7M8 | 0.0 | A0A445I7M8_GLYSO; Transcription factor bHLH130 isoform E | ||||
STRING | GLYMA13G27455.1 | 0.0 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF4005 | 33 | 59 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G42280.1 | 3e-48 | bHLH family protein |
Publications ? help Back to Top | |||
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