PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN37144.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 322aa    MW: 36504.2 Da    PI: 7.0454
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN37144.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.92.4e-10131174654
                 HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  + E++RR ++ s+f+ L+el+P++      K + ++++  A++YI++L
  KHN37144.1 131 TITEKQRRVDLSSKFDALKELIPNP-----SKSDRVSVVGDAINYIREL 174
                 678*********************9.....79999************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000838.46E-10123179No hitNo description
SuperFamilySSF474592.49E-13123197IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.7E-11124188IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088813.954125174IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.2E-10131180IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.9E-8131174IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    Send to blast
MEIIAEHPQQ NQYNYSNTTL ENHHQLPYPT PTVPDLLNLL HFPNPIPGDN STNVSSVSYD  60
PYLHLNLQQQ QQQPTLRDLL PHMPALSNDF PFAGHAVEGE GIQGFGNGVV DFTQDVGKKR  120
GGKRTKQFTS TITEKQRRVD LSSKFDALKE LIPNPSKSDR VSVVGDAINY IRELKRTVEE  180
LKLLVEKKRH DKQRVMMRRR HEVEADEGDF SNLQEPDQYS ESLRSSWIRR KSKDTVVDVR  240
IVDNEVTIKL VQRKKIDCLV HVSHLLDQLN LDLQHVAGGH IGDFCSYLFN TKICEGSSLY  300
ASAIAHKLIQ VMDTSFAAAS LA
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN37144.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028242797.10.0transcription factor bHLH91-like
TrEMBLA0A0B2RY420.0A0A0B2RY42_GLYSO; Transcription factor bHLH91
STRINGGLYMA08G36320.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14498811
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31210.13e-56bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]