PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KHN37086.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | bHLH | ||||||||
Protein Properties | Length: 268aa MW: 30500.2 Da PI: 5.3891 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 32.5 | 1.5e-10 | 161 | 208 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +hn +Er RR +iN+++ L+ ++P + k +s a +L + ++Y++sLq KHN37086.1 161 SHNLAERVRRGKINEKLRYLQNIVPGC----YKTMSMAVMLDEIINYVQSLQ 208 8*************************9....466*****************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00083 | 4.56E-11 | 155 | 212 | No hit | No description |
SuperFamily | SSF47459 | 3.93E-17 | 155 | 224 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 1.0E-16 | 157 | 218 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 15.377 | 157 | 207 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 1.0E-7 | 161 | 208 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 4.1E-9 | 163 | 213 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 268 aa Download sequence Send to blast |
MAEFTENLQN ISSSSPFLDI DPSMELLNQF IGMNQLYVLD NSNLMPYFSC DTFLGPQEPE 60 FPGNLEEDFP FLFHHVNHNA PPVSLPIFQA ENEIHEGNKR KSMDLLETSF ANSTSAVSET 120 GSKIKHSSGR GKRLKNNVTE EEEKAKEVVN ARARRGQATD SHNLAERVRR GKINEKLRYL 180 QNIVPGCYKT MSMAVMLDEI INYVQSLQHQ VEFLSLELTA ASTFYDFNSE IDAFETMQRS 240 RAYEAKELGK YKREGHGGVS LLQPTWHL |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Positive regulator of brassinosteroid signaling. {ECO:0000269|PubMed:12454087}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KHN37086.1 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by brassinosteroid, auxin, ethylene and cytokinin, and repressed by abscisic acid. Insensitive to gibberellic acid. {ECO:0000269|PubMed:12454087}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | KT031256 | 0.0 | KT031256.1 Glycine max clone HN_CCL_43 bHLH transcription factor (Glyma07g10311.1) mRNA, partial cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_003550247.1 | 0.0 | transcription factor BEE 1 | ||||
Refseq | XP_028209065.1 | 0.0 | transcription factor BEE 1-like | ||||
Swissprot | Q8GZ13 | 2e-55 | BEE1_ARATH; Transcription factor BEE 1 | ||||
TrEMBL | A0A445GA96 | 0.0 | A0A445GA96_GLYSO; Transcription factor BEE 1 | ||||
STRING | GLYMA17G34010.1 | 0.0 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF3360 | 34 | 67 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G18400.1 | 2e-53 | BR enhanced expression 1 |
Publications ? help Back to Top | |||
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