PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KHN36709.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | WRKY | ||||||||
Protein Properties | Length: 97aa MW: 10723 Da PI: 10.0373 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 32.9 | 1.3e-10 | 77 | 97 | 2 | 22 |
--SS-EEEEEEE--TT-SS-E CS WRKY 2 dDgynWrKYGqKevkgsefpr 22 +D ++WrKYGqK++kgs++pr KHN36709.1 77 SDSWAWRKYGQKPIKGSPYPR 97 69******************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 1.1E-9 | 68 | 97 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 4.84E-8 | 72 | 97 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 12.955 | 77 | 97 | IPR003657 | WRKY domain |
Pfam | PF03106 | 3.4E-6 | 78 | 97 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 97 aa Download sequence Send to blast |
MHHRRFSKLI HVADPDEPES GPEPASEAGP ASPSSGEDTK TEAPSPKKRR EMKKRVVTIP 60 IGDVDGSKSK GENYPPSDSW AWRKYGQKPI KGSPYPR |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KHN36709.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | EU019587 | 1e-147 | EU019587.1 Glycine max WRKY52 (WRKY52) mRNA, complete cds. | |||
GenBank | EU375351 | 1e-147 | EU375351.1 Glycine max transcription factor (WRKY16) mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028186817.1 | 2e-63 | probable WRKY transcription factor 69 | ||||
Swissprot | Q93WV5 | 3e-31 | WRK69_ARATH; Probable WRKY transcription factor 69 | ||||
TrEMBL | A0A445IBE9 | 4e-62 | A0A445IBE9_GLYSO; Putative WRKY transcription factor 69 isoform A | ||||
TrEMBL | A7LHI8 | 4e-62 | A7LHI8_SOYBN; Transcription factor | ||||
STRING | GLYMA12G33990.1 | 8e-63 | (Glycine max) | ||||
STRING | GLYMA13G36540.1 | 7e-63 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF2770 | 34 | 75 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58710.2 | 4e-29 | WRKY DNA-binding protein 69 |
Publications ? help Back to Top | |||
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