PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KHN36646.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | bHLH | ||||||||
Protein Properties | Length: 50aa MW: 6069.96 Da PI: 10.8559 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 17.5 | 7.6e-06 | 14 | 48 | 4 | 40 |
HHHHHHHHHHHHHHHHH.HHHHCTSCCC...TTS-.STC CS HLH 4 ahnerErrRRdriNsaf.eeLrellPkaskapskK.lsK 40 +++Er+RR++++ + ++L ++lP+ ++K sK KHN36646.1 14 ERKIVERNRRNQMKINLhSKLYSILPSY----NPKeWSK 48 5689*************99********7....3333555 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 50 aa Download sequence Send to blast |
MDQQQRGSQP TKVERKIVER NRRNQMKINL HSKLYSILPS YNPKEWSKDL |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KHN36646.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020229428.1 | 4e-15 | transcription factor bHLH162 |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF26778 | 3 | 3 |
Publications ? help Back to Top | |||
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