PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KHN36564.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | bHLH | ||||||||
Protein Properties | Length: 239aa MW: 26709.4 Da PI: 8.2225 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 16 | 2.3e-05 | 81 | 135 | 5 | 54 |
HHHHHHHHHHHHHHHHHHHHCTSCC.C.......TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPk.as....kapskKlsKaeiLekAveYIksL 54 + rE+ RRd++N++ + + ++ +s +++K +K++iL A + + +L KHN36564.1 81 KACREKLRRDKLNERHAIILHIVFLeLSsilePSRQPKSDKVAILSDAARVVIQL 135 678************88888888886667887779*************9887766 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 4.09E-8 | 69 | 151 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 9.166 | 76 | 135 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 1.36E-4 | 80 | 138 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 2.1E-8 | 84 | 148 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:1.20.5.170 | 1.1E-4 | 149 | 181 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 239 aa Download sequence Send to blast |
MDVNSSGGAS DWLYDYGFDI PVAGSDFMAS DSGGFRWGPQ SHNFKGPSNM SLEMEYSLDS 60 AVMENGPSKR LRTESCASGS KACREKLRRD KLNERHAIIL HIVFLELSSI LEPSRQPKSD 120 KVAILSDAAR VVIQLRNEAK RLKEMNDELQ AKVKELKGEK NELRDEKNRL KEEKEKLEQQ 180 VKVANIQPSF LPQAPDAKGQ VGSHKLIPFI GYPGIAMWQF MSPAAVDTSK DHLLRPPVA |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KHN36564.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | BT097126 | 0.0 | BT097126.1 Soybean clone JCVI-FLGm-15N2 unknown mRNA. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028187723.1 | 1e-168 | transcription factor bHLH115-like | ||||
Swissprot | Q9C682 | 6e-67 | BH115_ARATH; Transcription factor bHLH115 | ||||
TrEMBL | A0A445IC94 | 1e-166 | A0A445IC94_GLYSO; Transcription factor bHLH115 isoform A | ||||
STRING | GLYMA13G38140.1 | 1e-167 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF14916 | 12 | 14 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G51070.1 | 3e-61 | bHLH family protein |
Publications ? help Back to Top | |||
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