PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN34305.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 165aa    MW: 18800.9 Da    PI: 5.3311
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN34305.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.40.000592401754
                HHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH 17 NsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                +s  ++L + +P+ + k+++  ls  + L +A+ YIk L
  KHN34305.1  2 KSLCFKLVSTIPSnDLKPTKDMLSQQDQLDLATTYIKRL 40
                6777899999***876666666***************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.107.2E-4155IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 165 aa     Download sequence    Send to blast
MKSLCFKLVS TIPSNDLKPT KDMLSQQDQL DLATTYIKRL KERIEKLKGE KEKIMNMMMS  60
SNQNNNSIFN IGSQLPLLEI KDLGSGIEVM LISGLNKNFM LYEVISVLEE EGAEVVTANF  120
STVADKIFYT VHAQVKISRV GVEPTRVYQR LQELIAPLEI WEYIP
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN34305.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0959830.0BT095983.1 Soybean clone JCVI-FLGm-15G16 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003525498.11e-118transcription factor bHLH162
RefseqXP_028231504.11e-118transcription factor bHLH162-like
TrEMBLA0A445KJN21e-117A0A445KJN2_GLYSO; Transcription factor bHLH162
TrEMBLK7KMP71e-117K7KMP7_SOYBN; Uncharacterized protein
STRINGGLYMA05G02110.21e-117(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF68492141
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10586.17e-23bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]