PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KHN33180.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | bHLH | ||||||||
Protein Properties | Length: 246aa MW: 27533.8 Da PI: 7.2857 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 41 | 3.3e-13 | 67 | 113 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r+h+e+E+rRR+riNs +++Lr+llP + K +Ka+ L k+v+ +++L KHN33180.1 67 RNHKEAEKRRRERINSHLDKLRTLLPCN-----SKTDKASLLAKVVQRVREL 113 58*************************8.....7************998887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 15.739 | 64 | 113 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 8.9E-11 | 67 | 113 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 1.22E-12 | 67 | 118 | No hit | No description |
SuperFamily | SSF47459 | 1.44E-14 | 67 | 124 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 4.0E-14 | 68 | 122 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 5.2E-12 | 70 | 119 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:3.30.70.260 | 9.5E-5 | 160 | 223 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence Send to blast |
MENSELFQFL TNTNDAFFNT ASYGLPAAPA ASTMQHSFSG SFSYYPLEAS HDHHAPSHED 60 KALAALRNHK EAEKRRRERI NSHLDKLRTL LPCNSKTDKA SLLAKVVQRV RELKQQISSL 120 SDSEAFPSET DEVSVLSTSG DNDDHGGCDD NDGRLIFKAS LCCEDRSDLI PELIEILRSL 180 RLKTLKAEMA TLGGRTRNVL VVATDKDHSG ESIQFLQNSL KSLVERSSNS NDRSKRRRVL 240 DRKFIA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 234 | 238 | KRRRV |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KHN33180.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_003520293.2 | 0.0 | transcription factor bHLH106 | ||||
Refseq | XP_028208327.1 | 0.0 | transcription factor bHLH106-like | ||||
Swissprot | O80674 | 6e-73 | BH106_ARATH; Transcription factor bHLH106 | ||||
TrEMBL | A0A0B2RIV3 | 1e-180 | A0A0B2RIV3_GLYSO; Transcription factor bHLH106 | ||||
TrEMBL | A0A445LQ15 | 1e-179 | A0A445LQ15_GLYSO; Transcription factor bHLH106 | ||||
TrEMBL | K7K8S9 | 1e-179 | K7K8S9_SOYBN; Uncharacterized protein | ||||
STRING | GLYMA02G23590.2 | 1e-180 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF6672 | 32 | 49 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G41130.1 | 3e-68 | bHLH family protein |
Publications ? help Back to Top | |||
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