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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
KHN32954.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
GRAS |
Protein Properties |
Length: 552aa MW: 61690.3 Da PI: 5.8372 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
KHN32954.1 | genome | TCUHK | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 414.6 | 9.1e-127 | 179 | 550 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLar.lselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlta 98
l+e+L++cA+av+++d e a ++++ l +++s gdp+qRl ay++e+L+arl +s+s +ykal++++ + s + +++++++++++P+ kf++ a
KHN32954.1 179 LKEVLIRCAQAVADDDIETAVGFMNNvLAKMVSVGGDPIQRLGAYMLEGLRARLESSGSIIYKALKCEQPT---SNDLMTYMHILYQICPYWKFAYTSA 274
5789********************872566799999**********************************9...89999999***************** PP
GRAS 99 NqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLr 195
N I ea+ +e+r+ iiDf+i qG+QW+ L+qaLasRp+gpp + +Tgv++++s+ + l+ +g+rL+++A+++gvpfef+ +a +++ele+L
KHN32954.1 275 NAVIGEAMLNESRIRIIDFQIAQGTQWLLLIQALASRPGGPPFVHVTGVDDSQSFhaRGGGLHIVGKRLSDYAKSCGVPFEFHS-AAMCGSEVELENLV 372
***************************************************9999889999***********************.899*********** PP
GRAS 196 vkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgrei 294
++pgEal+Vn+ + lh+++desvs+e++rd++L+lvkslsPkvv++veqe+++n+++F++rf+e+l+yy+a+f+s+++ lpr++++ri+ E+++++r+i
KHN32954.1 373 IQPGEALVVNFPFVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLVEQESNTNTSPFFQRFAETLSYYTAMFESIDVALPRDDKQRINAEQHCVARDI 471
*************************************************************************************************** PP
GRAS 295 vnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
vn+vaceg+er+erhe l+kWr+r+++aGF p pls+ +++ ++ +l++++++ yr+e ++g+l+lgWk+r++ + SaWr
KHN32954.1 472 VNMVACEGDERVERHELLGKWRSRFSMAGFAPCPLSSLVTDAVRNMLNEFNEN-YRLEYRDGALYLGWKNRAMCTSSAWR 550
***************************************************55.*************************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 552 aa
Download sequence Send
to blast |
MQTSQKHPTS AGIHLYHQPA QDIDPYTHYQ ILQSNSCHEI HDNSSSQGTT ISFETSKDQY 60 FTLESSPVIN DLIGCDSPSY ASVSSNRSPF SPQASHSYHS DQHQSSDNTY GSPTSSHSTA 120 DDSYELKNKL RELEISLLGP DSDIVDSCHC SYKGGCHGAS PMAKYNWDQI VEMIPKLNLK 180 EVLIRCAQAV ADDDIETAVG FMNNVLAKMV SVGGDPIQRL GAYMLEGLRA RLESSGSIIY 240 KALKCEQPTS NDLMTYMHIL YQICPYWKFA YTSANAVIGE AMLNESRIRI IDFQIAQGTQ 300 WLLLIQALAS RPGGPPFVHV TGVDDSQSFH ARGGGLHIVG KRLSDYAKSC GVPFEFHSAA 360 MCGSEVELEN LVIQPGEALV VNFPFVLHHM PDESVSTENH RDRLLRLVKS LSPKVVTLVE 420 QESNTNTSPF FQRFAETLSY YTAMFESIDV ALPRDDKQRI NAEQHCVARD IVNMVACEGD 480 ERVERHELLG KWRSRFSMAG FAPCPLSSLV TDAVRNMLNE FNENYRLEYR DGALYLGWKN 540 RAMCTSSAWR CY
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that acts as a positive regulator of continuous red light signals downstream of phytochrome B (phyB). Required for the regulation of hypocotyl elongation during de-etiolation. May be required to modulate phytochrome A (phyA) signal transduction in a phyB-independent way. {ECO:0000269|PubMed:16680434}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By osmotic and cold stresses, and UV-A/B. {ECO:0000269|PubMed:16680434}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015038 | 0.0 | AP015038.1 Vigna angularis var. angularis DNA, chromosome 5, almost complete sequence, cultivar: Shumari. |