PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN32341.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 272aa    MW: 29698.8 Da    PI: 7.3973
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN32341.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.77.4e-1275121354
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 ++h+e+ErrRR+riN  +++Lr l+P+      +K++Ka+ L +++  +k+L
  KHN32341.1  75 KNHSEAERRRRERINGHLATLRGLVPST-----EKMDKATLLAEVISQVKEL 121
                 58*************************8.....8**********99988887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.4472121IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.3E-975121IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.45E-1376126IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.8E-1376127IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003536.2E-1278127IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd048737.25E-5161229No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    Send to blast
MVYSFYDKTS SSSSGSDISG LFNPTLHNLG ACNDLSSSPH SLVFESDKGE LVKCLAAAKV  60
GKSEICEAKA LAALKNHSEA ERRRRERING HLATLRGLVP STEKMDKATL LAEVISQVKE  120
LKKNAAEVSK GFLIPKDADE VKVEPYNDHE GGEGSMSYSA TICCDFRPEI LSDLRQTLDS  180
LPLHLVKAEI STLAGRMKNV FVFTCCKENI NNIDFEKCQA LASTVHQALC SVMEKASASL  240
DFSPRTSHAS KRRRLCFIET SNSTCNHGSC LC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18085ERRRRE
2250254KRRRL
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN32341.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0310990.0KT031099.1 Glycine max clone HN_CCL_46 bHLH transcription factor (Glyma02g15780.1) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028205831.10.0transcription factor bHLH30-like
TrEMBLA0A0B2RD480.0A0A0B2RD48_GLYSO; Transcription factor bHLH30
STRINGGLYMA02G15780.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF89863143
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.14e-39bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]