PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN31893.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 218aa    MW: 24730.8 Da    PI: 8.6255
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN31893.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.12.4e-114389455
                HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                 h + Er+RR+ + ++f  L  ++P +     kK +Ka++L +A++Y+k+L+
  KHN31893.1 43 DHIMSERKRRQLMAERFIALSAIIPGL-----KKIDKASVLSEAINYVKQLK 89
                5999***********************.....9*****************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.8753988IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.5E-1543102IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.7E-94388IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.09E-1543106IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.58E-104489No hitNo description
SMARTSM003537.2E-114594IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    Send to blast
MGGDISFFSE EHPNPTLYCV ANETHVQTGA KRGRSSWETP TRDHIMSERK RRQLMAERFI  60
ALSAIIPGLK KIDKASVLSE AINYVKQLKG RIAVLEQESS NKKSMMIFTK KCLQSHPHCE  120
KNSNHVLPQL QVEAIGLELE REVLIRILCE KPKGIFLKLL TLLENMHLSI VSSNVLPLGK  180
NTLNITIIAQ MGEEYNMTGD ELMSKLTQDL FKLYEVPQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14752ERKRRQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN31893.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003542127.11e-161transcription factor bHLH19
TrEMBLA0A0B2RIV91e-160A0A0B2RIV9_GLYSO; Transcription factor bHLH19
TrEMBLK7M4011e-160K7M401_SOYBN; Uncharacterized protein
STRINGGLYMA13G44582.11e-161(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14964813
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22760.16e-29bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]