PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KHN31558.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | bHLH | ||||||||
Protein Properties | Length: 246aa MW: 28268 Da PI: 8.4948 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 37.8 | 3.5e-12 | 74 | 126 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++ h e+Er+RR+++ + ++ Lr+llP + ++K s ++ +A +YIk++q KHN31558.1 74 KKMIHMEIERKRRQEMATFYASLRSLLPLEF--IKGKRSISDHMNEAANYIKHMQ 126 577899***********************65..*********************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 2.36E-13 | 72 | 144 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 4.15E-9 | 73 | 130 | No hit | No description |
PROSITE profile | PS50888 | 12.963 | 73 | 125 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 2.1E-9 | 75 | 126 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 6.5E-10 | 75 | 145 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 6.8E-5 | 79 | 131 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence Send to blast |
MLPLQRGNEL VIQFSNSPHH QQHKISEDLI LDDYASLNVN DSNQKFITSS SSQPTKKLFY 60 GANKKNHDSN EHKKKMIHME IERKRRQEMA TFYASLRSLL PLEFIKGKRS ISDHMNEAAN 120 YIKHMQNNIK ELGAKRDEMK KLSNHCNNME NNHAGLHTSC NFTIHENNGI MGIEITSGFR 180 EEKPKISKLL QFLTEEGFEV VSCFSTEVNG RLLHSVQCEV NNSNSVDLSE LRKKVSNAFP 240 TFRCSD |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 81 | 86 | ERKRRQ |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KHN31558.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_003548234.1 | 0.0 | transcription factor bHLH118 | ||||
Refseq | XP_028206682.1 | 0.0 | transcription factor bHLH118-like | ||||
TrEMBL | A0A0B2RHW1 | 0.0 | A0A0B2RHW1_GLYSO; Transcription factor bHLH126 | ||||
TrEMBL | I1MQ59 | 0.0 | I1MQ59_SOYBN; Uncharacterized protein | ||||
STRING | GLYMA16G32620.1 | 0.0 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF792 | 33 | 125 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25410.1 | 3e-39 | bHLH family protein |
Publications ? help Back to Top | |||
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