PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN30825.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 91aa    MW: 10552 Da    PI: 4.8487
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN30825.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.82.6e-0516581555
                HHHHHHHHHHCTSCCC...TTS-..STCHHHHHHHHHHHHHHH CS
         HLH 15 riNsafeeLrellPkaskapskK..lsKaeiLekAveYIksLq 55
                +iN+ + +L+ llP++ ++++ +   s + i ++++ +I+ Lq
  KHN30825.1 16 EINDLMLRLQALLPQLNQTRNSRasESLMKIMKETCSHINRLQ 58
                7**************8555555523445679999999999998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.104.2E-61571IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.83E-61672IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 91 aa     Download sequence    Send to blast
MSGQRNFRTS KFTESEINDL MLRLQALLPQ LNQTRNSRAS ESLMKIMKET CSHINRLQNE  60
VKDLGERLAE LIDSVDLSDI DEECLTRLLQ Q
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN30825.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003528189.12e-59transcription factor ILI4
RefseqXP_028234212.12e-59transcription factor ILI4-like
TrEMBLA0A0B2RBT55e-58A0A0B2RBT5_GLYSO; Transcription factor bHLH135
TrEMBLA0A445KBY36e-58A0A445KBY3_GLYSO; Transcription factor PRE4 (Fragment)
TrEMBLI1KCR45e-58I1KCR4_SOYBN; Uncharacterized protein
STRINGGLYMA06G20520.18e-59(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF106242439
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28857.13e-07bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]