PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN30401.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 281aa    MW: 31441.2 Da    PI: 5.4933
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN30401.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.71.2e-09756154
                CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                r++ +  rE+ RRdriN+ f eL  +l ++     +K++Ka+iL  +++ +k+L
  KHN30401.1  7 RKTQKADREKLRRDRINEQFVELGNILDPD----RPKNDKATILCDTIQLLKDL 56
                6788999********************997....79************999987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474595.37E-14576IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.1E-13678IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088812.995656IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.6E-7756IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.42E-6756No hitNo description
SMARTSM003533.1E-51262IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    Send to blast
MDCSAARKTQ KADREKLRRD RINEQFVELG NILDPDRPKN DKATILCDTI QLLKDLISQV  60
SKLKDEYAML NEESRELTLE KTDLREEKAS LKSDIDNLNN QYQQQLRTMF PWTAMEHSVM  120
MAPSSYPYPV PMAVPPGPIP MQPYPFFANQ HPAVISNPCS TYVPYLAPNT IVEQQSTLYV  180
SPPLHPGARP NVSGKQESKS KSSRESMAEK NEESNDVTTD LELKTPGSSA DQDLSSGQRK  240
SSKLSRRESS CTEWSSLGRC SSCSVQDSSS SSVVASRKDN E
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN30401.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0944370.0BT094437.1 Soybean clone JCVI-FLGm-24H6 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003546649.10.0transcription factor bHLH121
SwissprotQ9LT239e-91BH121_ARATH; Transcription factor bHLH121
TrEMBLA0A0B2R7H60.0A0A0B2R7H6_GLYSO; Transcription factor bHLH121
TrEMBLI1MI880.0I1MI88_SOYBN; Uncharacterized protein
STRINGGLYMA15G29630.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF22823376
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19860.11e-76bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]
  2. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  3. Min JH, et al.
    Arabidopsis Basic Helix-Loop-Helix 34 (bHLH34) Is Involved in Glucose Signaling through Binding to a GAGA Cis-Element.
    Front Plant Sci, 2017. 8: p. 2100
    [PMID:29321786]