PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KHN29532.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | bHLH | ||||||||
Protein Properties | Length: 152aa MW: 16760.1 Da PI: 4.4785 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 13.8 | 0.00011 | 7 | 44 | 11 | 54 |
HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +RR+ + + +++Lr++ + + l+Ka+i A +YI +L KHN29532.1 7 KRRASLEETLQQLRDVTNS------TALNKASIIVDASKYIEEL 44 6899999999999998665......46**************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:4.10.280.10 | 6.6E-7 | 7 | 57 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 9.95E-7 | 7 | 59 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS51671 | 8.551 | 83 | 152 | IPR002912 | ACT domain |
CDD | cd04873 | 3.36E-4 | 92 | 148 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0008152 | Biological Process | metabolic process | ||||
GO:0016597 | Molecular Function | amino acid binding | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 152 aa Download sequence Send to blast |
MAASREKRRA SLEETLQQLR DVTNSTALNK ASIIVDASKY IEELKQKVEG LNSELEIAES 60 STTTQIDELP MVIVKTLKKG FLINVLLEKN CPGMLVSILE AFEELGLDVL DARVSCEDSF 120 QLEAVGRESH KNDSVDAQVV KQAVLQAIKN AD |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KHN29532.1 |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | BT092309 | 0.0 | BT092309.1 Soybean clone JCVI-FLGm-10J13 unknown mRNA. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | NP_001236453.1 | 1e-105 | uncharacterized protein LOC100527466 | ||||
Refseq | XP_028180263.1 | 1e-105 | uncharacterized protein LOC114367306 | ||||
TrEMBL | A0A445J760 | 1e-104 | A0A445J760_GLYSO; Uncharacterized protein | ||||
TrEMBL | C6T4E8 | 1e-104 | C6T4E8_SOYBN; Uncharacterized protein | ||||
STRING | GLYMA09G41470.1 | 1e-105 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF724 | 10 | 15 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G09820.1 | 4e-06 | bHLH family protein |
Publications ? help Back to Top | |||
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