PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN28632.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family ERF
Protein Properties Length: 356aa    MW: 38416 Da    PI: 7.4341
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN28632.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.81.3e-182171256
         AP2  2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56
                ++ GVr+++ +grWvAeI+d      ++ r +lg+f+tae+Aa+a+++a+++l+g+
  KHN28632.1 21 RFVGVRQRP-SGRWVAEIKD----SlQKVRLWLGTFDTAEDAARAYDNAARALRGA 71
                689******.7*********....4456*************************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.107.1E-292178IPR001471AP2/ERF domain
PfamPF008471.8E-122170IPR001471AP2/ERF domain
PROSITE profilePS5103220.4952178IPR001471AP2/ERF domain
SMARTSM003803.4E-362184IPR001471AP2/ERF domain
CDDcd000181.35E-312178No hitNo description
SuperFamilySSF541716.54E-202278IPR016177DNA-binding domain
PRINTSPR003671.2E-72233IPR001471AP2/ERF domain
PRINTSPR003671.2E-74460IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 356 aa     Download sequence    Send to blast
MGAVSDGNRS RKKSSSRGHH RFVGVRQRPS GRWVAEIKDS LQKVRLWLGT FDTAEDAARA  60
YDNAARALRG ANARTNFELP ESSSGGATKR GGSKFVPDCT EPFSFEDVNE PGSEAEGLLG  120
ALKAKLLDGK KGKFQFQFLG NCSAPVVQSG MVSRSTQNCS GKKELLLPSS ANNTVLSRMN  180
GTGTCSPVHG LMSTLASSNT CAKTVVIPNH DHELVAVAST SSGRVYSHQL CQTPPVTTWP  240
NEVAYDLPWP TQYMSQVPDN SLLASSGAVA TLSTWPLSGV TESTVDMTYM DQGQSNSNKS  300
GQMMNMVSMQ LPLVGGANEG LWTLEQQQFV QCDQNNSWFS FNGSWDPLLY VPSELT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-1419771271Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN28632.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006597486.10.0uncharacterized protein LOC102661478
RefseqXP_028203660.10.0uncharacterized protein LOC114387651
TrEMBLA0A445GR290.0A0A445GR29_GLYSO; Ethylene-responsive transcription factor ERN1
TrEMBLI1MEV20.0I1MEV2_SOYBN; Uncharacterized protein
STRINGGLYMA15G09190.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF113333035
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.12e-13related to AP2 11