PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN27473.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family NAC
Protein Properties Length: 306aa    MW: 34500.1 Da    PI: 5.0086
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN27473.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM76.56e-241311336128
         NAM  36 evdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmh 124
                 e++i++++P++Lp  +k++ ++++fF+k+ ++yatg rk+r+         ++ +W++tg++k+v++ +g ++g kk++v+y  +++ +k+ kt+Wvmh
  KHN27473.1  13 ELGICYTHPQNLP-GAKTDGSSVHFFHKTVNAYATGPRKRRKihhqdgmtEEHVRWHKTGRTKAVIE-DGVHKGFKKIMVLYirSKKGSKPYKTNWVMH 109
                 568**********.55678899*******************86777777444788***********9.999***********7655667777******* PP

         NAM 125 eyrl 128
                 +y+l
  KHN27473.1 110 QYHL 113
                 **98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100523.91132IPR003441NAC domain
SuperFamilySSF1019417.45E-2710132IPR003441NAC domain
PfamPF023653.7E-725113IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    Send to blast
MFIHEFIPTL EGELGICYTH PQNLPGAKTD GSSVHFFHKT VNAYATGPRK RRKIHHQDGM  60
TEEHVRWHKT GRTKAVIEDG VHKGFKKIMV LYIRSKKGSK PYKTNWVMHQ YHLGSEEDEK  120
DDEYVVSKIF YQRQKHSEKN EENTVVEDSN IAAQAGPRTP KPNPPTRPCT GKCDDNFDEN  180
ELLSFIQDAK PIPGESHAPP YDVQDEDNKD DPAWLAGESQ ADFDGLEDIL LCKDMLDSSS  240
LLNHSGLSST YNANANKLVT PGTDNDYASY GVSVLDTLEF DTPPDFDLSN LQFGSQDSTL  300
QWIDTP
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN27473.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0156430.0AP015643.1 Vigna angularis var. angularis DNA, scaffold: Scaffold_0599, complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028231073.10.0SUPPRESSOR OF GAMMA RESPONSE 1 isoform X1
TrEMBLA0A445KHB50.0A0A445KHB5_GLYSO; Suppressor of gamma response 1
STRINGGLYMA05G09110.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF75723047
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25580.19e-55NAC family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]