PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN27262.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 424aa    MW: 45552.2 Da    PI: 7.0577
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN27262.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_168.51.1e-21279341163
                 XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                 e+elkrerrkq+NRe+ArrsR+RK+ae+eeL++kv+ L+aeN +Lk+e+ +l++ ++++++e+
  KHN27262.1 279 ERELKRERRKQSNRESARRSRLRKQAETEELARKVDMLTAENVSLKSEIIQLTEGSEQMRMEN 341
                 89**********************************************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077776.4E-33196IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165963.3E-23130258No hitNo description
Gene3DG3DSA:1.20.5.1705.9E-15275338No hitNo description
SMARTSM003385.4E-21279343IPR004827Basic-leucine zipper domain
PfamPF001704.3E-21279341IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.806281344IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.06E-10282337No hitNo description
CDDcd147023.73E-18284332No hitNo description
PROSITE patternPS000360286301IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 424 aa     Download sequence    Send to blast
MGNSEDEKSV KTGSPSSSPA TTDQTNQPNI HVYPDWAAMQ YYGPRVNIPP YFNSAVASGH  60
APHPYMWGPP QPMMPPYGPP YAAFYSHGGV YTHPAVAIGP HLHGQGVSSS PAVGTHSSIE  120
SPTKLSGNTD QGLMKKSKGF DGLAMSIGNC NAESAEHGAE NRQSQSVDTE GYSDGSDGNT  180
AGANQTKRKR CREGTLTTDG EGKTELQNGP ASKETSSSKK IVSATPASVA GTLVGPVVSS  240
VMATTLELRN PSTVDSKANS TSAPQPCAIV PNETCLQNER ELKRERRKQS NRESARRSRL  300
RKQAETEELA RKVDMLTAEN VSLKSEIIQL TEGSEQMRME NSALREKLRN TQLGQREEII  360
LSSIESKRAA PVSTENLLSR VNNSSSNDRT TENENDFCEN KPNSGAKLHQ LLDTNPRADA  420
VAAG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1295301RRSRLRK
2295302RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN27262.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By light.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0311410.0KT031141.1 Glycine max clone HN_CCL_141 BZIP transcription factor (Glyma16g03190.1) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003528815.10.0common plant regulatory factor 1 isoform X1
RefseqXP_028239449.10.0common plant regulatory factor 1-like isoform X1
RefseqXP_028239450.10.0common plant regulatory factor 1-like isoform X1
SwissprotQ990891e-132CPRF1_PETCR; Common plant regulatory factor 1
TrEMBLA0A0B2R6470.0A0A0B2R647_GLYSO; Common plant regulatory factor 1
TrEMBLI1KI000.0I1KI00_SOYBN; Uncharacterized protein
STRINGGLYMA07G06620.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF53013455
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.11e-100G-box binding factor 3
Publications ? help Back to Top
  1. Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K
    Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness.
    EMBO J., 1991. 10(7): p. 1777-86
    [PMID:2050115]
  2. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]
  3. Feldbrügge M,Hahlbrock K,Weisshaar B
    The transcriptional regulator CPRF1: expression analysis and gene structure.
    Mol. Gen. Genet., 1996. 251(6): p. 619-27
    [PMID:8757392]