PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KHN27012.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | bHLH | ||||||||
Protein Properties | Length: 230aa MW: 26429.2 Da PI: 8.633 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 37 | 6.1e-12 | 117 | 160 | 7 | 55 |
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 Er+RR++i++++++Lr l+P +K++ a+iL Av++Ik+Lq KHN27012.1 117 VTERNRRNKIKKGLFTLRYLVPRI-----TKMDRAAILADAVDHIKELQ 160 57*********************7.....7******************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00083 | 2.85E-10 | 108 | 164 | No hit | No description |
PROSITE profile | PS50888 | 13.649 | 110 | 159 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 1.7E-15 | 113 | 176 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 2.8E-11 | 116 | 165 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 1.8E-16 | 117 | 176 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 8.8E-10 | 117 | 160 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0055114 | Biological Process | oxidation-reduction process | ||||
GO:0032440 | Molecular Function | 2-alkenal reductase [NAD(P)] activity | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 230 aa Download sequence Send to blast |
GVVDWHRTLV KTSAWDYVVV WKYGDDPTRF IEWVGCCCSG SCIDVVKPEE EKAEVCNMAP 60 ICRDDHSPIP KTKMPKYNKT SGKRQRGLTS HCSNDDDDKS KSVKESQKEV YQAKNLVTER 120 NRRNKIKKGL FTLRYLVPRI TKMDRAAILA DAVDHIKELQ MQVRELKDEV RELEEQECEK 180 NTPQLRITKA KKQEGTGSNP PLNQSSSGCT KKMQMEVQVE LHHISKTDHI |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 120 | 127 | NRRNKIKK |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KHN27012.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_014626062.1 | 1e-108 | transcription factor bHLH90-like | ||||
TrEMBL | A0A0B2R575 | 1e-171 | A0A0B2R575_GLYSO; Transcription factor ABORTED MICROSPORES (Fragment) | ||||
STRING | GLYMA08G39470.2 | 2e-95 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF12265 | 30 | 33 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G16910.1 | 2e-20 | bHLH family protein |
Publications ? help Back to Top | |||
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