PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

KHN26436.1

Organism

Glycine soja

Taxonomic ID

3848

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja

Family

bZIP

Protein Properties

Length: 316aa MW: 35013.2 Da PI: 9.2348

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
KHN26436.1	genome	TCUHK	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	49.1	1.2e-15	246	297	5	57
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 +r++r++kNRe+A rsR+RK+a++ eLe kv Le+eN++L+ + +el+k+ + KHN26436.1 246 RRQKRMIKNRESAARSRARKQAYTTELEHKVSRLEEENEKLR-RQQELEKMLS 297 79****************************************.8899999865 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	4.9E-15	236	296	No hit	No description
SMART	SM00338	2.2E-11	242	298	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.542	244	289	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	3.9E-13	246	295	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	4.75E-11	246	291	No hit	No description
CDD	cd14707	3.61E-24	246	295	No hit	No description
PROSITE pattern	PS00036	0	249	264	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 316 aa Download sequence Send to blast
MGSQCGGDNS GKHSQLQPLV PQNSMYSLTL DEVQNHLGDL GKPLSSMNLD ELLKNVWTVE 60 ANQSTGVDIE GTALTSQAAL QRQASLSLTS ALSGKTVDEV WRDIQQSKDN KDKKSQERQS 120 TLGEMTLEDF LVKAGIVAEA SNRKNTGATV GVDSNVVAPQ FPQHGPWIQY AQPQYQHPQQ 180 GLMGIYIPGQ NKAQPLHMGA GVATDVLYAD GQVALSSPVM GTLSDTRRPG RKRGTSEDMV 240 EKTVERRQKR MIKNRESAAR SRARKQAYTT ELEHKVSRLE EENEKLRRQQ ELEKMLSSNP 300 PPEPRYQIRR TSSASF

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	KHN26436.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	BT096476	0.0	BT096476.1 Soybean clone JCVI-FLGm-15H3 unknown mRNA.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_003526362.1	0.0	ABSCISIC ACID-INSENSITIVE 5-like protein 2
Refseq	XP_014632338.1	0.0	ABSCISIC ACID-INSENSITIVE 5-like protein 2
Refseq	XP_028238370.1	0.0	ABSCISIC ACID-INSENSITIVE 5-like protein 2
Refseq	XP_028238371.1	0.0	ABSCISIC ACID-INSENSITIVE 5-like protein 2
Swissprot	Q9LES3	4e-92	AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBL	A0A0B2QXN6	0.0	A0A0B2QXN6_GLYSO; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBL	I1KFN0	0.0	I1KFN0_SOYBN; Uncharacterized protein
STRING	GLYMA06G47220.2	0.0	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1320	34	105

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56850.1	1e-87	ABA-responsive element binding protein 3

Publications ? help Back to Top
Qi X, et al. Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing. Nat Commun, 2014. 5: p. 4340 [PMID:25004933] Kim H, et al. ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis. Plant Mol. Biol., 2016. 90(3): p. 303-15 [PMID:26667153] Song C,Kim T,Chung WS,Lim CO The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions. Mol. Cells, 2017. 40(8): p. 577-586 [PMID:28756655]