PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN26134.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 264aa    MW: 29044.7 Da    PI: 7.6452
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN26134.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.52e-124780237
                HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS- CS
         HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskK 37
                +++h e+ErrRR+riNs +++Lr+llP+a  a+++K
  KHN26134.1 47 CKSHREAERRRRQRINSHLSTLRTLLPNA--AKGGK 80
                789*************************6..36666 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088810.0145105IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.4E-104780IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.1E-94882IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.09E-74880IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF550212.75E-5156222No hitNo description
Gene3DG3DSA:3.30.70.2604.3E-6156221No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    Send to blast
MLPFRRFYGF ESWLDHDAGH AQSSLIKKAV ELDGARSKTE RKSTEACKSH REAERRRRQR  60
INSHLSTLRT LLPNAAKGGK FKLCVGEREM SDHELLASGE SIKERESDDV VCGDSSSSSR  120
SAQPGSVRSE AWPFPGECDE VTVSYCDGED GEPKRVKATV CCGDRTGLNR DVSQAIRSVR  180
AKAVRAEMMT VGGRTKSVVV VEWEKEEEEV GALERALKAV VENRALVGFG MGPVILGQKR  240
GRDCCASPSS EVDSDFLLRN GSFC
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN26134.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2351870.0AC235187.1 Glycine max strain Williams 82 clone GM_WBb0010C08, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003518258.11e-142transcription factor bHLH30
RefseqXP_028212989.11e-142transcription factor bHLH30-like
TrEMBLA0A445LRW81e-141A0A445LRW8_GLYSO; Transcription factor AIG1 isoform A
TrEMBLI1JGZ81e-141I1JGZ8_SOYBN; Uncharacterized protein
STRINGGLYMA02G37720.11e-142(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF114412834
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G25710.16e-17basic helix-loop-helix 32
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]