PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KHN25590.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | ERF | ||||||||
Protein Properties | Length: 208aa MW: 23386.6 Da PI: 6.024 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.9 | 2.9e-19 | 16 | 66 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GVr++k +g+Wv+eIr+p gk+ r++lg++ ++e+Aa+a++ a++ l+g KHN25590.1 16 SSYRGVRQRK-WGKWVSEIREP---GKKSRIWLGSYESPEMAAAAYDVAALHLRG 66 67*******9.**********8...557*************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00847 | 8.0E-13 | 16 | 66 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 3.33E-23 | 16 | 76 | No hit | No description |
SuperFamily | SSF54171 | 1.96E-22 | 16 | 75 | IPR016177 | DNA-binding domain |
PROSITE profile | PS51032 | 23.261 | 17 | 74 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 9.0E-38 | 17 | 80 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 8.2E-32 | 17 | 75 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 6.7E-13 | 18 | 29 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 6.7E-13 | 56 | 76 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 208 aa Download sequence Send to blast |
MQECHVIAPT TTTATSSYRG VRQRKWGKWV SEIREPGKKS RIWLGSYESP EMAAAAYDVA 60 ALHLRGRAAR LNFPELVETL PRPTSSKPED VQVAAQQAAL MFKRLRVGLS ATKIQINNHQ 120 GCVNDNNIIK GSVVPVRVGL SPTQIQAINE SPLDSPKMWM VQMAEALRFG FDDHSMMMLP 180 SDDDDYALEL SGWEEIQHES LWDSPEYM |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1gcc_A | 2e-17 | 18 | 74 | 3 | 60 | ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KHN25590.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_003517540.2 | 1e-123 | ethylene-responsive transcription factor ERF022 | ||||
Refseq | XP_028179829.1 | 1e-123 | ethylene-responsive transcription factor ERF022-like | ||||
TrEMBL | A0A445M769 | 1e-122 | A0A445M769_GLYSO; Ethylene-responsive transcription factor ERF021 | ||||
TrEMBL | K7K5E7 | 1e-122 | K7K5E7_SOYBN; Uncharacterized protein | ||||
STRING | GLYMA01G44130.1 | 1e-123 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1777 | 31 | 91 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G33760.1 | 8e-43 | ERF family protein |
Publications ? help Back to Top | |||
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