PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN25590.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family ERF
Protein Properties Length: 208aa    MW: 23386.6 Da    PI: 6.024
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN25590.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.92.9e-191666155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                s y+GVr++k +g+Wv+eIr+p   gk+ r++lg++ ++e+Aa+a++ a++ l+g
  KHN25590.1 16 SSYRGVRQRK-WGKWVSEIREP---GKKSRIWLGSYESPEMAAAAYDVAALHLRG 66
                67*******9.**********8...557*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008478.0E-131666IPR001471AP2/ERF domain
CDDcd000183.33E-231676No hitNo description
SuperFamilySSF541711.96E-221675IPR016177DNA-binding domain
PROSITE profilePS5103223.2611774IPR001471AP2/ERF domain
SMARTSM003809.0E-381780IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.108.2E-321775IPR001471AP2/ERF domain
PRINTSPR003676.7E-131829IPR001471AP2/ERF domain
PRINTSPR003676.7E-135676IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    Send to blast
MQECHVIAPT TTTATSSYRG VRQRKWGKWV SEIREPGKKS RIWLGSYESP EMAAAAYDVA  60
ALHLRGRAAR LNFPELVETL PRPTSSKPED VQVAAQQAAL MFKRLRVGLS ATKIQINNHQ  120
GCVNDNNIIK GSVVPVRVGL SPTQIQAINE SPLDSPKMWM VQMAEALRFG FDDHSMMMLP  180
SDDDDYALEL SGWEEIQHES LWDSPEYM
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A2e-171874360ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN25590.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003517540.21e-123ethylene-responsive transcription factor ERF022
RefseqXP_028179829.11e-123ethylene-responsive transcription factor ERF022-like
TrEMBLA0A445M7691e-122A0A445M769_GLYSO; Ethylene-responsive transcription factor ERF021
TrEMBLK7K5E71e-122K7K5E7_SOYBN; Uncharacterized protein
STRINGGLYMA01G44130.11e-123(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF17773191
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33760.18e-43ERF family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]