PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN25102.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family FAR1
Protein Properties Length: 384aa    MW: 45018.3 Da    PI: 9.3973
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN25102.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR162.41.4e-1949145190
        FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk........tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                 +fY +YA evGF+v++s++ k  ++gei+ + + Cs++g+++e+++         +  + r r++tr gC+ak++ k+++dgk++v ++ + H H+la
  KHN25102.1  49 NFYTTYAVEVGFNVCRSTEVKY-KDGEIKFKYYLCSRQGFKAENRTIsaflvdekRMPKIRWRKQTREGCNAKIVFKRTTDGKYKVFQFYEGHKHALA 145
                 6****************99998.8899***************9988799*998877788889**********************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031017.5E-1749145IPR004330FAR1 DNA binding domain
PfamPF105515.0E-16253313IPR018289MULE transposase domain
Sequence ? help Back to Top
Protein Sequence    Length: 384 aa     Download sequence    Send to blast
ISYNDVNVTT PSKGLNDHVY TLQGWVPKCD KQLKPIVGNM FDTLEEGNNF YTTYAVEVGF  60
NVCRSTEVKY KDGEIKFKYY LCSRQGFKAE NRTISAFLVD EKRMPKIRWR KQTREGCNAK  120
IVFKRTTDGK YKVFQFYEGH KHALATPTKK QFLKSARNVK NVHKNLLLCF DKANIRNYDN  180
IGWTKKDLQN YSTGLKGLIK DTDDHMFVEN FRRKHEINNS FYYDLQVDDE GRLKYVFWAD  240
GLCRKNYSLF GGVVSFDTTY DTNKYCMVFA PFNGINRYQH SITFGVALLA NEKAESFEWL  300
FETFLKSMGG HKPIKVGASL NANIDFHSPF KSYIWNSESS KEFELTWKTI ICDFKLEENG  360
WLSQIYDMRS MWIPAYFKNK FLAE
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN25102.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024626623.11e-157protein FAR1-RELATED SEQUENCE 5-like
RefseqXP_024632184.11e-156protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A0B2QZL70.0A0A0B2QZL7_GLYSO; Protein FAR1-RELATED SEQUENCE 5 (Fragment)
STRINGGLYMA07G11941.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1492834
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.15e-50FAR1-related sequence 5
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]