PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KHN24678.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | ERF | ||||||||
Protein Properties | Length: 218aa MW: 24442.6 Da PI: 7.8993 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.2 | 4.9e-19 | 6 | 54 | 2 | 54 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkle 54 +++GVr+++ +g+Wv+eIr+p +r++lg+f taeeAa+a+++a+ + KHN24678.1 6 KFRGVRQRH-WGSWVSEIRHP-----LlkRRVWLGTFETAEEAARAYDQAAILMS 54 89******9.**********8.....334*********************98776 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:3.30.730.10 | 5.3E-33 | 5 | 63 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 2.15E-34 | 6 | 65 | No hit | No description |
SuperFamily | SSF54171 | 1.96E-20 | 6 | 64 | IPR016177 | DNA-binding domain |
PROSITE profile | PS51032 | 21.944 | 6 | 63 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 3.0E-40 | 6 | 69 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 3.6E-12 | 6 | 53 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.3E-10 | 7 | 18 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.3E-10 | 29 | 45 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 218 aa Download sequence Send to blast |
MVQTRKFRGV RQRHWGSWVS EIRHPLLKRR VWLGTFETAE EAARAYDQAA ILMSGRNAKT 60 NFPILQTPEG DPKTTLTPID HETSSSSTTT SKELEEILHA KLRKCGKLPS PSMTCLRLDP 120 ENSHIGVWQK RAGQRSDSNW VMMVPPLGKK GGANEGGTGG DASCSNSFPF SECDPTPQVA 180 RQELLRTEMD EEERIALQMI EELLSRNCPT SPSFNNLY |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1gcc_A | 3e-16 | 5 | 64 | 1 | 61 | ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Promotes cuticle formation by inducing the expression of enzymes involved in wax biosynthesis (PubMed:15070782, PubMed:15319479). Confers drought resistance (PubMed:15319479). Acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250, ECO:0000269|PubMed:15070782, ECO:0000269|PubMed:15319479}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KHN24678.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_003523983.1 | 1e-163 | ethylene-responsive transcription factor WIN1 | ||||
Refseq | XP_028228875.1 | 1e-163 | ethylene-responsive transcription factor WIN1-like | ||||
Swissprot | Q9XI33 | 8e-72 | WIN1_ARATH; Ethylene-responsive transcription factor WIN1 | ||||
TrEMBL | A0A0B2QY11 | 1e-162 | A0A0B2QY11_GLYSO; Ethylene-responsive transcription factor WIN1 | ||||
TrEMBL | I1JW69 | 1e-162 | I1JW69_SOYBN; Uncharacterized protein | ||||
STRING | GLYMA04G19650.1 | 1e-162 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF576 | 33 | 144 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G15360.1 | 2e-62 | ERF family protein |