PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KHN22773.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | B3 | ||||||||
Protein Properties | Length: 122aa MW: 13978.9 Da PI: 10.0315 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 33.6 | 7.2e-11 | 29 | 112 | 4 | 89 |
E-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS.-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 4 vltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesg.rsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 +l +++ + ++l+lp fa+ + + + +tl+l + +g ++ + i++k +++ +++Wk+F++ + k+gD++ F++ +++e KHN22773.1 29 QL-TKYKASGSQLSLPPGFAKFLwE-S--KFQTLSLINAEGlEEICHQRIHTKETKSIKTGRCWKKFCSKSRFKQGDTIKFEFGDKNE 112 44.778888899********76643.3..4569*****999877777777899999**************************754333 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101936 | 1.41E-8 | 21 | 111 | IPR015300 | DNA-binding pseudobarrel domain |
Gene3D | G3DSA:2.40.330.10 | 7.4E-9 | 22 | 112 | IPR015300 | DNA-binding pseudobarrel domain |
PROSITE profile | PS50863 | 8.713 | 25 | 121 | IPR003340 | B3 DNA binding domain |
Pfam | PF02362 | 4.9E-8 | 30 | 113 | IPR003340 | B3 DNA binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 122 aa Download sequence Send to blast |
MHEASGNQLV DNNHNNTYGG PQVRIFREQL TKYKASGSQL SLPPGFAKFL WESKFQTLSL 60 INAEGLEEIC HQRIHTKETK SIKTGRCWKK FCSKSRFKQG DTIKFEFGDK NENVAKVTKE 120 IV |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KHN22773.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A0B2QSJ7 | 4e-86 | A0A0B2QSJ7_GLYSO; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF26630 | 2 | 2 |
Publications ? help Back to Top | |||
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