PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN22328.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 253aa    MW: 28743.6 Da    PI: 7.4314
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN22328.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.11.6e-08157197954
                 HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  KHN22328.1 157 ARHRRERISERIRILQRLVPGG-----TKMDTASMLDEAIHYVKFL 197
                 699*****************87.....8****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.434148197IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.108.2E-14149213IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.14E-14152207IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.4E-13154203IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.4E-6158197IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.00E-6171202No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    Send to blast
MDMMTMMMLQ HLPEFSEPYT HTMEGFHPPS EEFCGNNNNN IRNTMQLADL IDNNNPLSPI  60
PWSSSYSFTH LPASTTEISF SNNSHPTTPI MLQEHEQQYE GANANPYGGE KRNSMAAMRE  120
MIFRMAAMQP IHIDPESVKA PKRRNVKISK DPQSVAARHR RERISERIRI LQRLVPGGTK  180
MDTASMLDEA IHYVKFLKTQ VQSLERASSA NNNIRPLNAA GQIGFPVAST PYFPLPSKPY  240
QAPNMDNMHD TYH
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN22328.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankDQ3369550.0DQ336955.1 Glycine max cultivar Williams 82 clone BAC gmw1-52d3, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003527719.10.0transcription factor HEC2
RefseqXP_028234244.10.0transcription factor HEC2-like
TrEMBLA0A445K4H70.0A0A445K4H7_GLYSO; Transcription factor HEC2
TrEMBLQ00M670.0Q00M67_SOYBN; Bhelix-loop-helix transcription factor
STRINGGLYMA06G04380.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF65134141
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50330.11e-41bHLH family protein