PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KHN22140.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | bHLH | ||||||||
Protein Properties | Length: 290aa MW: 33210.4 Da PI: 9.5336 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 32.8 | 1.2e-10 | 110 | 157 | 3 | 55 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r h +Er+RR+++ +++ L +P + kK +K+ ++++Av Y+k+Lq KHN22140.1 110 RVHILAERKRREELTKSIVALSATIPGL-----KKTDKVNVVREAVSYVKQLQ 157 56999***********************.....9******************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 14.202 | 107 | 156 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 2.36E-14 | 107 | 172 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 3.45E-9 | 108 | 161 | No hit | No description |
Pfam | PF00010 | 2.7E-8 | 111 | 157 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 4.1E-13 | 111 | 169 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 3.9E-11 | 113 | 162 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0055114 | Biological Process | oxidation-reduction process | ||||
GO:0032440 | Molecular Function | 2-alkenal reductase [NAD(P)] activity | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 290 aa Download sequence Send to blast |
MEDSRMDLLS QWEMGDDDFF NNQIHMISFT EEKSSKDMIF QQAFFSSSSS SSSLQSNLKP 60 CSPFPTGGYV LSFDKPVVEP LYPKKHHSPK SLAQSQYCVE PKAFPRTRPR VHILAERKRR 120 EELTKSIVAL SATIPGLKKT DKVNVVREAV SYVKQLQERV KELENQKRKE SMNSIILNKH 180 RPLSINDQAT HGFVDVNEEL LEVKVTVLDK EVLIGIYCEK QRQRLLKILS LLDNLHLSIT 240 HTSVLPFGTS TLKITIIAQM MKVISMTSQN LWNVERQLIG IMNSVLLEKH |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 115 | 120 | ERKRRE |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KHN22140.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028180534.1 | 1e-179 | transcription factor bHLH25-like | ||||
TrEMBL | A0A0B2QKZ2 | 0.0 | A0A0B2QKZ2_GLYSO; Transcription factor bHLH25 | ||||
STRING | GLYMA09G38241.1 | 1e-164 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF18728 | 4 | 6 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37850.1 | 9e-38 | bHLH family protein |
Publications ? help Back to Top | |||
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