PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KHN18953.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | ERF | ||||||||
Protein Properties | Length: 68aa MW: 7712.86 Da PI: 11.4134 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 28.8 | 3.1e-09 | 14 | 36 | 2 | 24 |
AP2 2 gykGVrwdkkrgrWvAeIrd.pse 24 +y+GVr ++ +gr++AeIrd +++ KHN18953.1 14 HYRGVRKRP-WGRYAAEIRDpWKK 36 69*******.**********8854 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 10.876 | 14 | 68 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.18E-6 | 14 | 42 | IPR016177 | DNA-binding domain |
Pfam | PF00847 | 3.1E-4 | 14 | 36 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 3.8E-11 | 14 | 42 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 0.0019 | 14 | 63 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 68 aa Download sequence Send to blast |
MAPSSSASAS REGHYRGVRK RPWGRYAAEI RDPWKKTRVM EGSPTASFLG FVRRGIPIDL 60 NEPPPMWL |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Transcription factor that binds to the GCC-box pathogenesis-related promoter element. Acts as a transcriptional inhibitor and may regulate other AtERFs (By similarity). {ECO:0000250, ECO:0000269|PubMed:11487705}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KHN18953.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_003593626.1 | 3e-17 | ethylene-responsive transcription factor 12 | ||||
Swissprot | Q94ID6 | 8e-16 | ERF81_ARATH; Ethylene-responsive transcription factor 12 | ||||
TrEMBL | A0A0B2QG70 | 8e-42 | A0A0B2QG70_GLYSO; Ethylene-responsive transcription factor 12 | ||||
STRING | AES63877 | 1e-16 | (Medicago truncatula) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF330 | 34 | 189 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G28360.1 | 3e-18 | ERF domain protein 12 |
Publications ? help Back to Top | |||
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