PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN18892.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 320aa    MW: 35161.4 Da    PI: 5.5566
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN18892.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.92.1e-09184232255
                 HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 ++++   Er+RR+ri + +  L ellP++        s a +L   ++Y+k+Lq
  KHN18892.1 184 KQKARVTERQRRQRIADNLKALHELLPNP-----AEGSQAYVLDDIIDYVKYLQ 232
                 6788999*********************8.....589****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000832.50E-9181236No hitNo description
Gene3DG3DSA:4.10.280.102.5E-11182241IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088812.989182231IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.27E-11183241IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.1E-6184232IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003538.8E-5188237IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    Send to blast
MEDQSNQENP GRPTSGVSHH QFPIPKVAIA ASSGRNGSHR TCLPKLTHHN YVEYLSESST  60
YNLPKTSTEF MMKSSYLPVG NISDGYGVSG TDRNFFYSDD PGKACSFKTI GSSSNDLDIS  120
KVGFWRADEG IKVETESSQN LVYAESHASW TSDSVGDKHN ASHDPMFMVG APTLLPKPGC  180
SSSKQKARVT ERQRRQRIAD NLKALHELLP NPAEGSQAYV LDDIIDYVKY LQLQIKEQSG  240
SRLLQADSTA IPLVFHEGYG HYINQKMLNE PLEEIMGKLV EDDSAAAVQL LESKGLFLLP  300
MALVDELSEA VQMFGGSALV
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN18892.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028184464.10.0transcription factor bHLH7-like isoform X2
TrEMBLA0A0B2QGI70.0A0A0B2QGI7_GLYSO; Transcription factor bHLH69
STRINGGLYMA02G16745.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF121642426
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30980.12e-22LJRHL1-like 2
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]