PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KHN18024.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | GeBP | ||||||||
Protein Properties | Length: 199aa MW: 22955.4 Da PI: 10.3103 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 72 | 1.1e-22 | 1 | 79 | 19 | 97 |
DUF573 19 lidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 + +f +ktg++p++ daf +fvk+s+ +++s++q+ eKirrLKkKf++k ++ak+ ++p+fsk hd+ +felskk+Wg KHN18024.1 1 MAEFISKTGQDPYKYADAFQNFVKNSLRVEASSNQIKEKIRRLKKKFETKAQRAKKWEDPEFSKFHDRTVFELSKKVWG 79 67899*************************************************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04504 | 1.4E-20 | 1 | 79 | IPR007592 | Protein of unknown function DUF573 |
Sequence ? help Back to Top |
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Protein Sequence Length: 199 aa Download sequence Send to blast |
MAEFISKTGQ DPYKYADAFQ NFVKNSLRVE ASSNQIKEKI RRLKKKFETK AQRAKKWEDP 60 EFSKFHDRTV FELSKKVWGE GANGLVEKPK PNNGKRKTAK TPKKDATSRN VVAKSETTTL 120 LESMELEECG NVNLLYREVS GFKELNEDEM KRGLALIGES KRKELEGKWR KLRLAEMELV 180 ANRSLLIGEQ IKLIFEALQ |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KHN18024.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028231985.1 | 1e-143 | GLABROUS1 enhancer-binding protein-like | ||||
TrEMBL | A0A445KL49 | 1e-142 | A0A445KL49_GLYSO; Putative transcription factor | ||||
STRING | GLYMA05G12406.1 | 1e-141 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1831 | 34 | 90 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25210.1 | 3e-18 | DNA-binding storekeeper protein-related transcriptional regulator |
Publications ? help Back to Top | |||
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