PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KHN17676.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | bHLH | ||||||||
Protein Properties | Length: 542aa MW: 61169.6 Da PI: 5.8912 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 42.8 | 9.2e-14 | 351 | 397 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 + h + ErrRR+++N+ f+ Lr+llP+ +K +Ka+iL+ A+e ++sL KHN17676.1 351 QQHTISERRRREKLNENFQALRTLLPPG-----TKKNKATILTTATETMRSL 397 579***********************97.....8*************99988 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 14.449 | 348 | 397 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 2.88E-15 | 351 | 414 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 3.1E-11 | 351 | 397 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 3.3E-17 | 352 | 412 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 1.13E-11 | 353 | 402 | No hit | No description |
SMART | SM00353 | 8.9E-12 | 354 | 403 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 542 aa Download sequence Send to blast |
MHSMDGVFAL PEAARADCLR SLVQSCGCTY VSLWQYDSNL SNLFFLDGFY DATNNQQSSS 60 LGSVAERLLH QYRALTFDVN DHEYVPGVVF RNQLPYIELQ LLDLLRLTST EIQTKFFQEA 120 GIEIAVFMGC KNGEIELGFS NISQVDIQTT LKNLFPQDFY IHSQSTTDQN PPLSSSSSSS 180 SFMSLSTGRP DQCSSSLLLS SIPGTSQYHF PQTLPTQTQT QTQTSPQYQA LDLVPVIPSY 240 FPTPEGEHEA IVKAFISVMS SSSTSTSQQH QPHQIVPKYT SVVHPGATAF NKCRPDTLNP 300 NITPQLGSNF RSQSLQKRSF EFFRNLNNLT RMRERVTQPA PRPISTQHQY QQHTISERRR 360 REKLNENFQA LRTLLPPGTK KNKATILTTA TETMRSLMDE IEKLNMRNQQ LMTVLSVKEA 420 TATSTEENKA KPSSSYERLN VGVSHVSESS SSEEQMVNLQ VTVRGESCLV DLLIQLLEFL 480 ERVQNVNFVS MDANNHITGE TAINQLTFRL RIIEGIEWDE HAFEEAVRRV AADTIQWQPL 540 EQ |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 356 | 361 | ERRRRE |
2 | 357 | 362 | RRRREK |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KHN17676.1 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006600454.1 | 0.0 | putative transcription factor bHLH041 | ||||
Refseq | XP_028208794.1 | 0.0 | putative transcription factor bHLH041 | ||||
TrEMBL | A0A445G2C1 | 0.0 | A0A445G2C1_GLYSO; Putative transcription factor bHLH041 | ||||
STRING | GLYMA17G06190.2 | 0.0 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF4150 | 33 | 54 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G56960.1 | 3e-43 | bHLH family protein |
Publications ? help Back to Top | |||
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