PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KHN16873.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | bHLH | ||||||||
Protein Properties | Length: 349aa MW: 39401.1 Da PI: 7.5694 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 19.9 | 1.4e-06 | 168 | 194 | 4 | 30 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC CS HLH 4 ahnerErrRRdriNsafeeLrellPka 30 +h+ +Er RR++i +++ +L++l+P + KHN16873.1 168 SHSLAERVRREKISERMKTLQRLVPGC 194 8************************85 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00083 | 3.87E-9 | 162 | 229 | No hit | No description |
SuperFamily | SSF47459 | 1.7E-14 | 162 | 241 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 4.6E-14 | 164 | 236 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 14.97 | 164 | 224 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 1.6E-7 | 170 | 230 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 349 aa Download sequence Send to blast |
MAAFSSQYYH PFLVDSACLS ITPPIINTSS TLPPSPHYLL NNNNIHIQET SYSVTNNQET 60 SCVDNQSSKV TTISDTEYSV VNKNHSPETS MVVDKLEKGE QFTQKVVTPM EKEKKRRARN 120 GSSKESTEGG NEKQKKPKEV KKDEKKGAED PPTGYIHVRA RRGQATDSHS LAERVRREKI 180 SERMKTLQRL VPGCDKAWSF TSLIFYVTGK ALVLDEIINY VQSLQNQVEF LSMKLALVNP 240 MFYDLAIDLD TLMVRPDQKL NYNIASPSPC LAQFRPNQAI AFADTTTTNS FPTANNGDYL 300 LDYSSSLFLQ GPRSNLFFEY NGGQFWDVED QRQKFLHPYG FGNNSGSFN |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KHN16873.1 |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | BT093492 | 0.0 | BT093492.1 Soybean clone JCVI-FLGm-24M5 unknown mRNA. | |||
GenBank | BT094901 | 0.0 | BT094901.1 Soybean clone JCVI-FLGm-14F14 unknown mRNA. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_003532431.2 | 0.0 | transcription factor bHLH137 | ||||
Refseq | XP_028247174.1 | 0.0 | transcription factor bHLH137-like | ||||
TrEMBL | A0A445J8B0 | 0.0 | A0A445J8B0_GLYSO; Transcription factor bHLH137 | ||||
STRING | GLYMA08G01210.1 | 0.0 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF4182 | 33 | 58 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G50915.2 | 2e-49 | bHLH family protein |
Publications ? help Back to Top | |||
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