PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN15866.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family NAC
Protein Properties Length: 400aa    MW: 45231.2 Da    PI: 4.3466
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN15866.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM125.73.7e-3961383128
         NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk......kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                 +G+ F+Pt++elv++yLk+k+ g++ ++ +vi+ +d+++vePw+ p       +++ ++ +w+fFs+ d ky ++kr nr+tk g+Wkatgkd+++ + 
  KHN15866.1   6 VGLGFRPTEQELVNFYLKHKLLGDDPRV-HVIPVIDLCDVEPWNVPVilasssAIRFGDPDWFFFSPVDFKYLKSKRFNRTTKCGFWKATGKDRDIRTG 103
                 6999*********************999.99***************64666655555889*************************************98 PP

         NAM  96 ..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                   +++++g+kktLv+y+gr + g+k++Wv+hey++
  KHN15866.1 104 dtDNTVIGTKKTLVYYQGRVSCGVKSNWVIHEYHA 138
                 667778***************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100542.1744156IPR003441NAC domain
PfamPF023652.3E-226137IPR003441NAC domain
SuperFamilySSF1019412.35E-426156IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 400 aa     Download sequence    Send to blast
MDDDIVGLGF RPTEQELVNF YLKHKLLGDD PRVHVIPVID LCDVEPWNVP VILASSSAIR  60
FGDPDWFFFS PVDFKYLKSK RFNRTTKCGF WKATGKDRDI RTGDTDNTVI GTKKTLVYYQ  120
GRVSCGVKSN WVIHEYHAVT FHENQRTFVL CCLMKKPGKT TEGGTDPLIC DEGEPSRSMV  180
SDYENQPTAE GIASEGTFTG IEAIFQATPW AENCFSPIQQ SPTLIEQEGA SFPNYAFNNA  240
YFRNEDNIMQ TPFETTKEDE FLNLILADES IVINEENKHD FVNSSTQSES LKRVSCESSD  300
TDAEVISKLD DNIVDISTAC NDYPNSDEYY SSKRFKSSHD AVHGGICFLL SNLEANQEKN  360
ESMFQDSFWG TETSSCDSTL DKPLEINYID ISSSPFTPWR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A1e-26715620165NO APICAL MERISTEM PROTEIN
1ut4_B1e-26715620165NO APICAL MERISTEM PROTEIN
1ut7_A1e-26715620165NO APICAL MERISTEM PROTEIN
1ut7_B1e-26715620165NO APICAL MERISTEM PROTEIN
3swm_A2e-26715623168NAC domain-containing protein 19
3swm_B2e-26715623168NAC domain-containing protein 19
3swm_C2e-26715623168NAC domain-containing protein 19
3swm_D2e-26715623168NAC domain-containing protein 19
3swp_A2e-26715623168NAC domain-containing protein 19
3swp_B2e-26715623168NAC domain-containing protein 19
3swp_C2e-26715623168NAC domain-containing protein 19
3swp_D2e-26715623168NAC domain-containing protein 19
4dul_A1e-26715620165NAC domain-containing protein 19
4dul_B1e-26715620165NAC domain-containing protein 19
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN15866.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028207213.10.0NAC domain-containing protein 69-like
TrEMBLA0A445GCY20.0A0A445GCY2_GLYSO; Protein NTM1-like 9 isoform A
STRINGGLYMA16G01940.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20652586
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.13e-42NAC transcription factor-like 9
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]