PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KHN15700.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | bHLH | ||||||||
Protein Properties | Length: 193aa MW: 21476.9 Da PI: 7.0869 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 24.5 | 4.9e-08 | 23 | 69 | 6 | 54 |
HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 e+E++RR ++ + Lr+ lP + ++K s ++ +Av+YI+ L KHN15700.1 23 REVEKQRRTNMSILCASLRSSLPFeL---IKGKRSASDHIGEAVNYIQIL 69 699*********************78...******************966 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 1.57E-11 | 14 | 87 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 11.058 | 17 | 69 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 1.21E-5 | 17 | 73 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 4.5E-8 | 22 | 85 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 3.5E-5 | 23 | 69 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 193 aa Download sequence Send to blast |
MAQENQHIIL VTSDNDERKI IRREVEKQRR TNMSILCASL RSSLPFELIK GKRSASDHIG 60 EAVNYIQILK QKINALQVKR DRLKLMVNSS LLETSIDQPE HSGAVVKCVN INLIPGGVEI 120 AICSSGLEEG SNSPLSEFME ILLQEGCDVV SCVSTLANGR IFHAIKCEVE ADLTRLDLAK 180 LQHKLDHAIL LPR |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KHN15700.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_003556078.3 | 1e-138 | transcription factor bHLH36 | ||||
Refseq | XP_028221504.1 | 1e-138 | transcription factor bHLH36-like | ||||
TrEMBL | A0A445F5C3 | 1e-137 | A0A445F5C3_GLYSO; Transcription factor bHLH120 isoform A | ||||
TrEMBL | I1NGM8 | 1e-137 | I1NGM8_SOYBN; Uncharacterized protein | ||||
STRING | GLYMA20G29130.1 | 1e-137 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF792 | 33 | 125 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51790.1 | 8e-28 | bHLH family protein |
Publications ? help Back to Top | |||
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