PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN15649.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 550aa    MW: 59013.4 Da    PI: 5.343
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN15649.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.26.8e-09366414355
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +h+ +Er RR++i +++  L++l+P +    sk   Ka +L + ++Y++sLq
  KHN15649.1 366 NSHSLAERVRREKISERMKFLQDLVPGC----SKVTGKAVMLDEIINYVQSLQ 414
                 58*************************9....556*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000833.17E-11361418No hitNo description
SuperFamilySSF474597.2E-17361432IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.485363413IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.4E-16364430IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.0E-6366414IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003537.7E-10369419IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 550 aa     Download sequence    Send to blast
MGDKEKFELD RNEDPMSYSS GMHSDWRFGG ANIASSSVAM VGLGNSMNVS RGDLIGSSSC  60
SSASMVDSFG PNYWENPTCS QNLGFCDINV HNNGGSSSTV AIRKDGFGFG RAGQDHHETL  120
EMGWNPANSI LSNGPGMFPH TLSQFPTDSG FIERAARFSC FSGGNFSDMV NSYGIAQSMG  180
LYGARDAIAG HGMKSVTGGQ SQGGDMNVVE ATKDVSPSVE HLVAAKGSPL KSDRRSEGHV  240
ISQDEGKQSL VRPANESDRA ESSDDGGGQD DSPMLEGTSG EPSSKGLNTK KRKRSGQDGD  300
NDKANGAQEL PSEGAEDNYE NQQKGDHQPT STAKASGKNA KLGSQASDPP KEEYIHVRAR  360
RGQATNSHSL AERVRREKIS ERMKFLQDLV PGCSKVTGKA VMLDEIINYV QSLQRQVEFL  420
SMKLATVNPR LDFNIEGLLA KDILQQRPGP SSALGFPLDM SMAFPPLHPP QPGLIHPVIP  480
NMANSSDILQ RTIHPQLAPL NGGLKEPNQL PDVWEDELHN VVQMSFATTA PLTSQDFDGT  540
GPASQMKVEL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1289294KKRKRS
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN15649.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150430.0AP015043.1 Vigna angularis var. angularis DNA, chromosome 10, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003516668.20.0transcription factor bHLH49 isoform X1
RefseqXP_006573184.10.0transcription factor bHLH49 isoform X1
RefseqXP_014629311.10.0transcription factor bHLH49 isoform X1
RefseqXP_014629313.10.0transcription factor bHLH49 isoform X1
RefseqXP_014629321.10.0transcription factor bHLH49 isoform X1
RefseqXP_028232373.10.0transcription factor bHLH49-like
RefseqXP_028232382.10.0transcription factor bHLH49-like
RefseqXP_028232390.10.0transcription factor bHLH49-like
RefseqXP_028232398.10.0transcription factor bHLH49-like
TrEMBLA0A0B2Q6P10.0A0A0B2Q6P1_GLYSO; Transcription factor bHLH49
TrEMBLK7K2A60.0K7K2A6_SOYBN; Uncharacterized protein
STRINGGLYMA01G09400.30.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF72493248
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68920.31e-114bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]