PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KHN15478.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | ERF | ||||||||
Protein Properties | Length: 186aa MW: 20314.9 Da PI: 8.9796 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 26.3 | 1.9e-08 | 2 | 40 | 13 | 54 |
AP2 13 grWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54 g++ ++Ir+p gk+ ++lg+f++a e aka++aa+ k+ KHN15478.1 2 GKYGVYIRHP---GKKILVWLGTFDSAIEVAKAYDAAAIKFC 40 8999*****8...557**********************9975 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 13.116 | 1 | 50 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 2.7E-11 | 2 | 56 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.5E-8 | 2 | 50 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 2.3E-14 | 2 | 50 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 2.82E-16 | 2 | 49 | No hit | No description |
Gene3D | G3DSA:3.30.730.10 | 1.8E-5 | 78 | 103 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 186 aa Download sequence Send to blast |
MGKYGVYIRH PGKKILVWLG TFDSAIEVAK AYDAAAIKFC GFDKAKTNFS IPQNHNNNVV 60 IQTPTTMDSL TTNFTSHNQE AAKAYDAAAI KFCDPDKART NFPIPKIHKN NMVIQTPTTI 120 NSSTTTTNPS SSMSLPIHVN CSTSHNQGHS GCSSSSTFIV VEAGKKLDVD LNYPPPPRNP 180 LNREQC |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KHN15478.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028242307.1 | 1e-137 | ethylene-responsive transcription factor 11-like | ||||
TrEMBL | A0A0B2Q5Y7 | 1e-136 | A0A0B2Q5Y7_GLYSO; Ethylene-responsive transcription factor 9 | ||||
STRING | GLYMA07G31995.1 | 1e-104 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF35587 | 2 | 2 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G44210.1 | 7e-17 | erf domain protein 9 |
Publications ? help Back to Top | |||
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