PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN15400.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 264aa    MW: 30286.2 Da    PI: 7.9891
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN15400.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH16.12.1e-05101146555
                 HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 h ++Er RR+r +++   L ++lP+      +K +  ++ ++A + I  Lq
  KHN15400.1 101 HMINERMRRQRQRQCCLALHSILPQG-----TKTDNNSVIQMAAKEIVRLQ 146
                 7899********************97.....79999999999998887776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474593.14E-1093161IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088810.56396145IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.9E-6101163IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009414Biological Processresponse to water deprivation
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    Send to blast
MDRFFPEKIL GEIFWDEPFL ATDQSDLVQY SQINKAEASP PAATPSAFVQ YRDLPRRINS  60
LNGSNSQIMS KKMLAFLRKS WPWPVERNNV QENERNRSFR HMINERMRRQ RQRQCCLALH  120
SILPQGTKTD NNSVIQMAAK EIVRLQGCRE ELQRKNVELE ANLEGVESSK GSGSKVQYLR  180
VPHPKSGIDS MVEILKCLKD KGVDTRSIKS TFSPQELFAV LETETDEVAD ADVESATWGT  240
HDELDWKLHS DAREGSNKKQ KTIH
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN15400.1
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0963470.0BT096347.1 Soybean clone JCVI-FLGm-9N23 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006574490.10.0transcription factor bHLH92
RefseqXP_028191547.10.0transcription factor bHLH92
TrEMBLA0A445LHM40.0A0A445LHM4_GLYSO; Transcription factor bHLH92 isoform A (Fragment)
STRINGGLYMA02G00290.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF125722734
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43650.11e-22bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]