PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN14918.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 303aa    MW: 34649.8 Da    PI: 8.8185
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN14918.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.43.9e-1162114155
                 CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                 ++ +hn  Er RR+++N+  + Lr llP  +   + kK+s  +++ ++ +YI +Lq
  KHN14918.1  62 KKLSHNDSERDRRKKVNNLVSSLRLLLPVeD---QTKKMSIPATVSRVLKYIPELQ 114
                 6789*************************66...8888***************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.96361113IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.76E-962118No hitNo description
SuperFamilySSF474592.62E-1362132IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.0E-962130IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.7E-862114IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.9E-767119IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    Send to blast
MVALFTPTVF STKGWLLEEE PLSYDVSSKN SFPYQFYSLQ TQIEVEIERS TAPSPDDPAM  60
VKKLSHNDSE RDRRKKVNNL VSSLRLLLPV EDQTKKMSIP ATVSRVLKYI PELQHQVQAL  120
NKKKEELLCR ISKNLKGDSV NKESQRRIAH HNSDFVVSTS RLNIQERASP GAAVKLCLGD  180
LLVMGSNPET ASLHMHAYNI PPPYLRIAKS LWTMGYKVFF TSRLNDCEAV VHISFYEVHK  240
VPLSEILHCL ENNGLLLLNA SSSETFGGRF FYNLHFQVEK AHRLESEILT EKLLSIYEKQ  300
RIF
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN14918.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0311011e-179KT031101.1 Glycine max clone HN_CCL_45 bHLH transcription factor (Glyma03g28630.1) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028215977.11e-113transcription factor ORG2-like
TrEMBLA0A0B2Q4H70.0A0A0B2Q4H7_GLYSO; Transcription factor ORG2
STRINGGLYMA03G28630.11e-111(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF24023379
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.17e-25bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]