PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN14774.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family WRKY
Protein Properties Length: 364aa    MW: 41017.9 Da    PI: 5.3023
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN14774.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY87.99e-28129186259
                 --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                 dDgy+WrKYGqK +kg  +pr+YY+C+sagC v+k+ver+++++k v+itY g+Hnhe
  KHN14774.1 129 DDGYRWRKYGQKIMKGCLYPRAYYKCASAGCFVRKHVERDSRNNKNVIITYDGRHNHE 186
                 8********************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.6E-29116188IPR003657WRKY domain
PROSITE profilePS5081131.399123188IPR003657WRKY domain
SuperFamilySSF1182901.31E-24124188IPR003657WRKY domain
SMARTSM007741.0E-29128187IPR003657WRKY domain
PfamPF031065.9E-22129186IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 364 aa     Download sequence    Send to blast
MEGCQPLAEQ MQSSNDVAKT VKLPLPFDLN TIPNEDEEAR PATSDETWLP DSESDDNFRP  60
LQQPSSTPDA PVDIDDVEDR ASIVEGGSDS GNRKRKRSLE ESDKGTAGRS FHGETELTVR  120
IGSKKEIDDD GYRWRKYGQK IMKGCLYPRA YYKCASAGCF VRKHVERDSR NNKNVIITYD  180
GRHNHEQPPS WITNKNKLVL DDEGDEEDED DGGEELAPTN NALITRNFLM NTPNPAEPQV  240
HTLQLRNDMN PEFANRFMRP NHFGSLNNNM NIGSSSNNPH MHYSFLNNTN SMPHRSYGFN  300
LDNPYATPQP RGPSMFPQLP TSPPFNNINV PSSRGFSSQA WRNNDKNGSS SVFPSRETGA  360
RDKH
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A1e-22119188877Probable WRKY transcription factor 4
2lex_A1e-22119188877Probable WRKY transcription factor 4
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN14774.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028184915.10.0WRKY transcription factor WRKY24-like
TrEMBLA0A445INN30.0A0A445INN3_GLYSO; WRKY transcription factor 1
STRINGGLYMA10G31413.14e-92(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3588922
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13960.13e-25WRKY DNA-binding protein 4
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]