PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN14773.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family WRKY
Protein Properties Length: 257aa    MW: 28815.7 Da    PI: 6.353
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN14773.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY33.58.3e-11141163123
                 ---SS-EEEEEEE--TT-SS-EE CS
        WRKY   1 ldDgynWrKYGqKevkgsefprs 23 
                 ldDgynWrKYGqK++kg ++pr+
  KHN14773.1 141 LDDGYNWRKYGQKVIKGHTYPRK 163
                 59*******************96 PP
2WRKY78.38.8e-25195253159
                 ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                 +dDgy+W  YG K++kg+ fpr YY+C+sagC+++k+v+r++ ++k v++tY g+Hnhe
  KHN14773.1 195 VDDGYQWHQYGLKTMKGNLFPRVYYKCASAGCCARKEVDRNSVNTKHVITTYVGKHNHE 253
                 59********************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.6E-10130166IPR003657WRKY domain
PROSITE profilePS5081114.171136179IPR003657WRKY domain
SuperFamilySSF1182906.67E-9138163IPR003657WRKY domain
SMARTSM007745.0E-4141178IPR003657WRKY domain
PfamPF031061.7E-7142163IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.1E-24190255IPR003657WRKY domain
PROSITE profilePS5081127.106190255IPR003657WRKY domain
SuperFamilySSF1182906.02E-22191255IPR003657WRKY domain
SMARTSM007741.1E-22195254IPR003657WRKY domain
PfamPF031068.9E-20196253IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    Send to blast
MEGCQPLAPP TQDVAEQVHS SNDAEKVKFR FDLNAKPDEE EEVSAKVGGG SETHAAVSES  60
ADNVGPDNGL ELTLNNDVHP THAADDSDYE EDRASIGEGG SDTENRKRKR SLEEYKKGTG  120
KSFHGETTVV VQFESKNETI LDDGYNWRKY GQKVIKGHTY PRKRKRSDNR GMGSVVRRET  180
FVLPFETQSE TVIFVDDGYQ WHQYGLKTMK GNLFPRVYYK CASAGCCARK EVDRNSVNTK  240
HVITTYVGKH NHEPPTN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A7e-20185255877Probable WRKY transcription factor 4
2lex_A7e-20185255877Probable WRKY transcription factor 4
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN14773.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028184916.11e-114probable WRKY transcription factor 20
TrEMBLK7LJY11e-110K7LJY1_SOYBN; Uncharacterized protein
STRINGGLYMA10G31413.11e-111(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1873256
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13960.11e-20WRKY DNA-binding protein 4
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]