PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN14753.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 815aa    MW: 91300.4 Da    PI: 4.4131
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN14753.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.29.2e-066286651355
                 HHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  13 RdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 R++i +++ eLr+++P++     +K s  + L ++++Y+  Lq
  KHN14753.1 628 RQQIQDCIKELRRIIPND-----GKCSIDSLLDRTIRYMLFLQ 665
                 89***************9.....8999999**********998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF142151.3E-1459149IPR025610Transcription factor MYC/MYB N-terminal
CDDcd000832.87E-4608669No hitNo description
PROSITE profilePS5088811.236615664IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.09E-6628677IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.8E-4628669IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 815 aa     Download sequence    Send to blast
MTMAMTMPLT LRNKLKTLCT CGDGWSYAIF WRFHPRNSLL LTVEEAYYEE HLGEEIANMH  60
PQVHLLGEGI VGEAASTGKH SWVHSDGQTH DWNLTGQNIC EDDSEFQQQF SSGIKTIVVV  120
PVKAWGVVQF GSRKKILEKV EFLEQTQSVL TDMDDDMGMF DMPGNSVLPL DCENNDLNGL  180
WDSISSANPN NSFPSQYMTY DKAMVSLQED SSYFSDQLKG TMEAQIVLSD RDSADVLLKP  240
NSSTNKLIAE NPYFGVCGSE LSSFNLLEQQ LVSCVSAQED ADACFTNQND FAASKLLVQD  300
SALTSLCSMD RGSFQGKLQN SLDNQYPTQS GVVIDVDFSS SSNALHGLSE NLEPVDMSEE  360
ILNFSPMEDL CQWFGPSPED SICEAVIALD NNFSESTEFN PTSFDLVGSS SLNDISVTCL  420
AEHNSNSNGK EASVVMQSTE KGLFDSMEFD FSYDQGDEWW GNMLSPVVSG VTDTGFSECV  480
SELNTTDALT GTRKRLFSEL GIEELLRGGA NYNPFNSSEL EYELSPNKSE TVESSSVNRN  540
PIHFTNFHWP GARADLTQRL CDLDNTNNLP TKKDKFPKLQ TGMWIDDSHS INIGKAVPVH  600
PQKPEEPRKP SKKRARPGES TRPRPKDRQQ IQDCIKELRR IIPNDGKCSI DSLLDRTIRY  660
MLFLQSVLKY SDKLQEPNEP KLIEQAKEVV LKDSGAADSK NGGITWAYEV AHQTMLYPVI  720
VEDMSLPGQM LIEMLCEEQG FFLEIIDKIQ RFGLNILKAK MERRKTKLWA RFIVEANRPV  780
TRIEVFLYLI HLLQETNTSG IDSSNKHCDV IEANI
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN14753.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006589236.10.0transcription factor bHLH155 isoform X1
RefseqXP_028183397.10.0transcription factor bHLH155-like isoform X1
TrEMBLA0A445INT90.0A0A445INT9_GLYSO; Transcription factor LHW isoform A
TrEMBLK7LJZ20.0K7LJZ2_SOYBN; Uncharacterized protein
STRINGGLYMA10G31691.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF69551621
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31280.11e-36conserved peptide upstream open reading frame 7
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]