PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN13651.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family ERF
Protein Properties Length: 307aa    MW: 34421.1 Da    PI: 7.1809
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN13651.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.23e-1688139155
         AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 s+y+GV +++ +grW+A+I   +   g +k+ +lg++ t eeAa a++ a+ +++g
  KHN13651.1  88 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYSTQEEAAHAYDIAAIEYRG 139
                 89****99**********99966...3.6*************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541719.81E-1888149IPR016177DNA-binding domain
PfamPF008478.4E-1288139IPR001471AP2/ERF domain
CDDcd000182.00E-2488149No hitNo description
SMARTSM003801.3E-2589153IPR001471AP2/ERF domain
PROSITE profilePS5103218.47989147IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.6E-1889148IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    Send to blast
MVMMKENIIE VKLGRSQMSM VEGEFQGTWG VKRRRREVAA AASSRDDNHH QQSPQQEVGE  60
NSSISTTKRS SRFRGVSRKS SGFSRGVSKY RGVARHHHNG RWEARIGRVF GNKYLYLGTY  120
STQEEAAHAY DIAAIEYRGI HAVTNFDLST YIKWLKPSGG GTPEANLESH AVLEHQKLAS  180
PSNYALTEES KSLVLHNSFI SPDSLDSPVK HESFGNKTYQ FSSNKSSSPT ALGLLLRSSL  240
FRELVEKNSN VSGEEADGEV TKDQQPQIAS DDDLDGIFFN SFGDIPFVCD STRYNLEFQE  300
RELHSIF
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN13651.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2358920.0AC235892.2 Glycine max clone GM_WBc0089E01, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028213246.11e-170ethylene-responsive transcription factor WRI1-like
TrEMBLA0A445FXP71e-170A0A445FXP7_GLYSO; Ethylene-responsive transcription factor WRI1 isoform B
STRINGGLYMA18G49101.11e-161(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF21983283
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54320.22e-38ERF family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]