PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN13645.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family WRKY
Protein Properties Length: 512aa    MW: 55872.6 Da    PI: 7.4107
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN13645.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.73.2e-30162221159
                 ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 ++Dg++WrKYGqK  kg+++pr+YYrCt a +Cpv+k+v+r+aed +++++tYeg+Hnh+
  KHN13645.1 162 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApTCPVRKQVQRCAEDLSILITTYEGTHNHP 221
                 58***************************99****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.5E-31148221IPR003657WRKY domain
SuperFamilySSF1182907.72E-27155222IPR003657WRKY domain
PROSITE profilePS5081127.014157223IPR003657WRKY domain
SMARTSM007744.5E-36162222IPR003657WRKY domain
PfamPF031061.0E-26163221IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 512 aa     Download sequence    Send to blast
MGEVKEENER LKMMLERVEK DYHSLQLRFF DILHKDVSKK GLAVSSTSLD HETAEPELVS  60
LCLGRSPMEP KKELARIGYS NKPKEEDVGP NLTLGLDSKH LLSMEVVSDL SPTNSSEEPK  120
EVEAEGTNQS AKVINVNDDV SDQMPAKRAR VSVRARCDTP TMNDGCQWRK YGQKIAKGNP  180
CPRAYYRCTV APTCPVRKQV QRCAEDLSIL ITTYEGTHNH PLAVSATAMA STTSAAASML  240
LSGSSTSHLT SHNSASFGNA PTTLLNGVSF SHQFDELRAK QMLSPPNHVS PNLFSTITLD  300
MTSSASNSSS STQFHHRLPS TIASISNPKF SPASLSFCSQ DNNFIPSIWG KGGDTSTTPI  360
DKIPMTRPVI KGNQYFQENF YQQSITKQTP SKEALAETIT KAISTDPSLR SVIAAAVSSI  420
VGNGSSSGNQ EESDNVLGSG LNLKLGEHFQ LASPNPLNQN RKECLTSYFK SLSSKNSEAG  480
SFIFLQPSLP FSFSKSSTNQ VNHYVQEMNS HH
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A1e-19149222173WRKY transcription factor 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN13645.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028212670.10.0probable WRKY transcription factor 72
TrEMBLA0A445FY880.0A0A445FY88_GLYSO; Putative WRKY transcription factor 72
STRINGGLYMA18G49140.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF65034134
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15130.11e-63WRKY DNA-binding protein 72
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]