PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN12830.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family G2-like
Protein Properties Length: 371aa    MW: 40921.8 Da    PI: 8.3496
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN12830.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like100.31.3e-31211266156
     G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                 k+r++W++eLH+rF++a++qLGG++ AtPk+i+elmkv+gLt+++vkSHLQk+Rl+
  KHN12830.1 211 KQRRCWSQELHKRFLHALQQLGGADSATPKQIRELMKVDGLTNDEVKSHLQKFRLH 266
                 79****************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129412.783208268IPR017930Myb domain
SuperFamilySSF466894.54E-18209269IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.3E-28209269IPR009057Homeodomain-like
TIGRFAMsTIGR015575.1E-27211266IPR006447Myb domain, plants
PfamPF002491.2E-6213263IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 371 aa     Download sequence    Send to blast
MQFAEKMQPL KMGFREYIEA LEEERKKIQV FPKELPLSLE LVTQAIEACR QQLCGTVAEY  60
NLNAQSECSE QTSTDGPVFE EFIIPIKKKA SQASVEEDDD EEHSHKHTKT TTDKKKSDWL  120
RSVQLWNPNP PPTKEDVVPR KTNVVEVKRN GGGAFQPFQR EEKSGVSKAN NNNEASAIGK  180
APSSPPVPAT SYTEPVRVDS KKEEKGDAQR KQRRCWSQEL HKRFLHALQQ LGGADSATPK  240
QIRELMKVDG LTNDEVKSHL QKFRLHTRRS PIIHNSASSQ AGSLFLVGNI FVQPPEYATS  300
SASGGELTTA TPAAPTGIYA PVAAHLPAGT HRSPIMKHSH SPSEEKNNHS VHSNSPASSS  360
STHTITTSPP A
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN12830.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0311800.0KT031180.1 Glycine max clone HN_CCL_160 MYB/HD-like transcription factor (Glyma02g10940.1) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028201675.10.0transcription factor HHO2-like
TrEMBLA0A0B2PUL00.0A0A0B2PUL0_GLYSO; Transcription factor HHO3 isoform A
STRINGGLYMA02G10940.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF39183363
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68670.12e-72G2-like family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]