PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KHN11994.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | G2-like | ||||||||
Protein Properties | Length: 187aa MW: 21315.1 Da PI: 8.4809 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 96.7 | 1.6e-30 | 18 | 71 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtpeLH++Fvea+e+LGG++kAtPk+il+ m vkgL ++h+kSHLQ+YR KHN11994.1 18 PRLRWTPELHQHFVEAIESLGGKHKATPKRILQQMRVKGLRIAHIKSHLQMYRN 71 8****************************************************5 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 12.505 | 14 | 74 | IPR017930 | Myb domain |
Gene3D | G3DSA:1.10.10.60 | 1.3E-27 | 15 | 71 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 8.8E-24 | 18 | 73 | IPR006447 | Myb domain, plants |
SuperFamily | SSF46689 | 3.23E-14 | 18 | 72 | IPR009057 | Homeodomain-like |
Pfam | PF00249 | 8.3E-9 | 19 | 70 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 187 aa Download sequence Send to blast |
MIKNSESSVR KYNKSELPRL RWTPELHQHF VEAIESLGGK HKATPKRILQ QMRVKGLRIA 60 HIKSHLQMYR NRKGHAIIAP VGQLLEDFKI CSISPTERIL KREETDYDLN QEPQSSALLL 120 SDDVSNEEEN FADLSFSFST PLMSIIQREN SKEIMRFSSS TAAANHSVDS SSTPSFANNY 180 INLDLTI |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4k_A | 7e-19 | 19 | 73 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 7e-19 | 19 | 73 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 7e-19 | 19 | 73 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 7e-19 | 19 | 73 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 7e-19 | 19 | 73 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 7e-19 | 19 | 73 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 7e-19 | 19 | 73 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 7e-19 | 19 | 73 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KHN11994.1 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006575636.1 | 1e-104 | putative Myb family transcription factor At1g14600 | ||||
TrEMBL | A0A445H0V2 | 1e-136 | A0A445H0V2_GLYSO; Putative Myb family transcription factor | ||||
TrEMBL | K7M4P3 | 1e-136 | K7M4P3_SOYBN; Uncharacterized protein | ||||
STRING | GLYMA14G03527.1 | 1e-136 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF9186 | 28 | 39 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40260.1 | 4e-27 | G2-like family protein |
Publications ? help Back to Top | |||
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